Gene Sfum_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0700 
Symbol 
ID4461292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp853845 
End bp854504 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content57% 
IMG OID639701462 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_844833 
Protein GI116748146 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.977876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGTC GTTTTCATCA AGAGCTGGAT CAACTCAAGC TGACCATCCT GAAGATGGCG 
GCTTTAACCG AAACCGCATT GGAAAAAGGC ATCCACGCGT TATTCGAGCG CGACGTCGAG
ATCGCCGACG AGGTGATCCG TGGAGACCGG GAAATCAATC TGCTCGAGAT CGACGTGGAC
AAGTACTGCC TCAGGCTGCT CGCCCTGGAC CAGCCCATGG CGCGGGACCT CAGGTTCATC
ATCGGCTGCA TGAAAATTTC GGTCGATCTC GAACGAATCG CGGACCAGGC CGTCAACGTC
GCGGAACGGG CCATCGTTCT CAGCCAAAGC CCCCCCCTGC CCCGGAACCC GCTCATGCTC
GAGTTGGCGG AAACGGCTCT CGATATGGTC CGTTGCGCCA TCAGCGCTTT CGTCCAGGAG
AACGTCACGC AGGCCAGAGA CGTGTGCCAG TTGGACGATA ACGCGGACGA GCTCAACGTG
ACCGTTCTCA AGAACCTTCT CAATTACATG GTCAAGGAAG TACCGGCCGT GGAACGATCC
GTGCAAACCA TCATCGTTGC GCGGTGCCTC GAGCGGGTGG CCGATCAGGC GACCAATATC
GCGGAAAGCG TCATTTTCAT CGTCCAGGGC ATGAACATCA AACACCATTG CGACCAGTGA
 
Protein sequence
MESRFHQELD QLKLTILKMA ALTETALEKG IHALFERDVE IADEVIRGDR EINLLEIDVD 
KYCLRLLALD QPMARDLRFI IGCMKISVDL ERIADQAVNV AERAIVLSQS PPLPRNPLML
ELAETALDMV RCAISAFVQE NVTQARDVCQ LDDNADELNV TVLKNLLNYM VKEVPAVERS
VQTIIVARCL ERVADQATNI AESVIFIVQG MNIKHHCDQ