Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0700 |
Symbol | |
ID | 4461292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 853845 |
End bp | 854504 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639701462 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_844833 |
Protein GI | 116748146 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.977876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGTC GTTTTCATCA AGAGCTGGAT CAACTCAAGC TGACCATCCT GAAGATGGCG GCTTTAACCG AAACCGCATT GGAAAAAGGC ATCCACGCGT TATTCGAGCG CGACGTCGAG ATCGCCGACG AGGTGATCCG TGGAGACCGG GAAATCAATC TGCTCGAGAT CGACGTGGAC AAGTACTGCC TCAGGCTGCT CGCCCTGGAC CAGCCCATGG CGCGGGACCT CAGGTTCATC ATCGGCTGCA TGAAAATTTC GGTCGATCTC GAACGAATCG CGGACCAGGC CGTCAACGTC GCGGAACGGG CCATCGTTCT CAGCCAAAGC CCCCCCCTGC CCCGGAACCC GCTCATGCTC GAGTTGGCGG AAACGGCTCT CGATATGGTC CGTTGCGCCA TCAGCGCTTT CGTCCAGGAG AACGTCACGC AGGCCAGAGA CGTGTGCCAG TTGGACGATA ACGCGGACGA GCTCAACGTG ACCGTTCTCA AGAACCTTCT CAATTACATG GTCAAGGAAG TACCGGCCGT GGAACGATCC GTGCAAACCA TCATCGTTGC GCGGTGCCTC GAGCGGGTGG CCGATCAGGC GACCAATATC GCGGAAAGCG TCATTTTCAT CGTCCAGGGC ATGAACATCA AACACCATTG CGACCAGTGA
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Protein sequence | MESRFHQELD QLKLTILKMA ALTETALEKG IHALFERDVE IADEVIRGDR EINLLEIDVD KYCLRLLALD QPMARDLRFI IGCMKISVDL ERIADQAVNV AERAIVLSQS PPLPRNPLML ELAETALDMV RCAISAFVQE NVTQARDVCQ LDDNADELNV TVLKNLLNYM VKEVPAVERS VQTIIVARCL ERVADQATNI AESVIFIVQG MNIKHHCDQ
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