Gene Sfum_0699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0699 
Symbol 
ID4461291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp852612 
End bp853673 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content64% 
IMG OID639701461 
Productthreonine aldolase 
Protein accessionYP_844832 
Protein GI116748145 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.715932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCA TCGATCTGCG TTCCGATACG GTCACACAAC CGACCCAAAG CATGCGCCGC 
GCCATGGCGG AAGCGAAAGT GGGCGACGAC GTTTTCGGTG AAGACCCAAC CGTCAACACG
CTCCAGGAAA AGGCCGCAGA ACGCCTGGGC AAGGAAGCCG CTCTTTTCGT GGCCAGCGGC
ACCATGGCCA ACCTGGTGAG CCTGTTGACT CATTGCGGCC GCGGCGATGA GGTCATCCTG
GGCGACCGGT CCCACATCTT CCTGTACGAA CAGGGCGGGA CCGCGGCTCT TGGCGGAATT
CATCCCCGCA CGGTCCCCAA CGAACCGCAC GGCACCATGA GCGTCTGCGG CATCGAAGCG
GCCATCCGGG AAGAGAACGT GCACTTCCCC CCGACCCGCC TGATTGCCCT GGAGAACACG
CACAACCGGT GCAGCGGCAG TCCGCTCGGC CCGGCCTACC TGCGCGAGGT GAGAGCGCTG
GCGGACCGAT ACGGGCTTAA GGTCCACGTT GACGGCGCGC GCCTTTTCAA TTCCTCCGTC
GCCCAGGGCG TCGACGTCCG GGAATTGAGC GCCGCGGCCG ACACCGTCAC CATCTGCCTG
AGCAAGGGGC TTTCCGCGCC CGTGGGTTCG CTCGTTTGCG GCACGCGCGA TTTCATCGCA
CGGGCACGAC GCACTCGAAA GGTGGTTGGC GGCGGCATGC GCCAGGCGGG CATCCTTGCG
GCCGCCGGCA TCGTCGCCCT CGACGAAATG GTGACTCGCC TCGCCGAGGA TCACGCCAAT
GCCCGCGCGC TCGCCGAAGG CCTCTCCACC ATGACCGGCC TGTCCGTCGA TCTGGAATTC
GTTAAAACGA ACATCGTTTT CATCGACGTG GAACGCGAAG ATCTCACCGC CCCGGTTCTC
GCCGCGCGGT TGAAACCCGA CGGCGTTCTC GTCCAGGTCA CCGGACCCCG GCGGATGAGA
GCGGTCACTC ACTACGGGGT GAGCGCCGAG GACATCGACT TCACCCTGAC GGCATTCAAG
AAAGCCATGG GGTCAAACCT ACACTTTTCA CATTTTCCAT GA
 
Protein sequence
MHIIDLRSDT VTQPTQSMRR AMAEAKVGDD VFGEDPTVNT LQEKAAERLG KEAALFVASG 
TMANLVSLLT HCGRGDEVIL GDRSHIFLYE QGGTAALGGI HPRTVPNEPH GTMSVCGIEA
AIREENVHFP PTRLIALENT HNRCSGSPLG PAYLREVRAL ADRYGLKVHV DGARLFNSSV
AQGVDVRELS AAADTVTICL SKGLSAPVGS LVCGTRDFIA RARRTRKVVG GGMRQAGILA
AAGIVALDEM VTRLAEDHAN ARALAEGLST MTGLSVDLEF VKTNIVFIDV EREDLTAPVL
AARLKPDGVL VQVTGPRRMR AVTHYGVSAE DIDFTLTAFK KAMGSNLHFS HFP