| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0678 |
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| Symbol | |
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| ID | 4460180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 822986 |
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| End bp | 823870 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701435 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_844812 |
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| Protein GI | 116748125 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0265142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGT GGCTTGATCT GTTCCTGAAC CATATCACGG TGGAAAAAGG GTTGAGCCCG
AACACGGTTG CCGGGTACGG CGGGGATCTG CAGGAGATGC TCGGCTACTT CGGGAAGCAC
GGTGTGTCGA GCTGGGAGGC GGTATCCCGG GAGGACATCG TGAGTTACCT GGAATCCGTT
TCGGGCAGGC TTTCCCACCG ATCCAAGGCG CGACGCCTGG CCGCCCTGCG CGCATTCTTC
AAGTATCTCG AGCGAACCGG GAAAATGTCC GGGAGCCCTG CCGCGCTCGT TCGTTTTCCG
AAGTTCAATC CGGGTCTGCC GAAGACCCTC ACGGGCAGGG AAGTCGATGC GCTTCTGGCC
GCGCCGGCCG CGGGCACTCC GCTCGGACAG AGAGACCGGG CCATGCTCGA GCTGCTCTAC
GCAACGGGGC TGAGGGTCAG CGAGCTCGCG GACCTGCAAC TCGATCAAGT CCACCTCGAA
GCCGGGTATC TCGTGGCCCG GGGCAAAGGG GACAAGGAAA GGCCGGTCCC CATGGGAGAA
CCGGCCGGCG AGGCGCTTCA AATCTATCTC CGCGACGGAC GGCGACGGCT CTTGAAGGAC
GGCCGAAGCC GGGAGGTTTT CCTCAACCGC CGCGCCGTGA AGCTCACGCG GCAGGGCATT
TGGAAAATCA TCAAGCAGTA TGCGCTCAAG TCGGGAATCC GGCAGAACCT GACTCCCCAC
GTGCTCCGTC ACTCCTTCGC GACGCATCTG CTCGAGAACG GAGCCGATCT TCGGTCGTTG
CAGGCAATGC TGGGGCACGC CGATATCTCG ACGACGCAGA TATACACTCA TGTGGCGAAA
AAACGGTTGA AGGAAGTTCA CCTGAAATTT CACCCGCGAC CGTAG
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| Protein sequence | MDRWLDLFLN HITVEKGLSP NTVAGYGGDL QEMLGYFGKH GVSSWEAVSR EDIVSYLESV
SGRLSHRSKA RRLAALRAFF KYLERTGKMS GSPAALVRFP KFNPGLPKTL TGREVDALLA
APAAGTPLGQ RDRAMLELLY ATGLRVSELA DLQLDQVHLE AGYLVARGKG DKERPVPMGE
PAGEALQIYL RDGRRRLLKD GRSREVFLNR RAVKLTRQGI WKIIKQYALK SGIRQNLTPH
VLRHSFATHL LENGADLRSL QAMLGHADIS TTQIYTHVAK KRLKEVHLKF HPRP
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