Gene Sfum_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0676 
Symbol 
ID4460211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp819578 
End bp821011 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content59% 
IMG OID639701433 
Productcarbamoyl-phosphate synthase L chain, ATP-binding 
Protein accessionYP_844810 
Protein GI116748123 
COG category[C] Energy production and conversion 
COG ID[COG1038] Pyruvate carboxylase 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.068223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA AACTTCTGGT GGCCAACCGG GGCGAAATTG CCATTCGTAT CATACGTTCC 
GCCCAGGAAC TCGGAATCAA GACCGTTGCC GTCTACGAGG AGACGGACAA GACGGCGATG
CACATCATGC GCGCCGACGA AGCCGTCTGT CTCGGATCGG GACCGCGCAA GGACTACCTG
AACATCGACC GGATCGTCCA GGCCGCTCTG AGCACGGGTG CGGAAGCGAT CCATCCGGGA
TACGGCTTTC TGGCGGAAAA CCCGATGTTC TCGAAAAAAT GCACCGACGC GGGCCTGGTC
TTTGTCGGGC CTCCCCCCCA GGTCATCATC GATATGGGCA ACAAGGTGGT TGCGCGCAGG
ATCATGAAGA ATGCCGGGAT CCCGGTCATC CCGGGGACCG ATATCCTGGA GGAGGGTGAG
CTGGGGGAGC AGGACGCCGT GGATTTCGCG GAGGAATACG GCTTCCCCAT TATGGTGAAA
GCGGTGGCAG GCGGTGGAGG ACGCGGCATT CGGGTCGCGA CGAACGTGGG CGAGCTGATC
AAGGGCCTGA AGATGGCGCG TTCCGAAGCC CGGATGGCGT TCGGCAACGA TGACATCTAC
CTGGAGAAGG GATTGGGCAA TCCAAGGCAC GTGGAAGTCC AGATCGTCGC CGACCGGTTT
GGAGACGTGA TTCACCTCGG CACGAGGAAC TGCTCGATTC AAAGACGGCA CCAGAAGATG
ATCGAAATCG CCCCCGCCTC GCTTCCCGCC GACTTGTCGG AAAACGTCTG CCGGACCGCC
GTCAAGGCGG CCAAGGCGTG CAATTACGTG AACGCGGGCA CGGTGGAGTT TCTGCTGGAT
GAGGCCGACA ATTACTACTT CCTCGAAGTG AATACGCGCA TCCAGGTCGA GCACACCATC
ACCGAAATGA TCACCGGGAT CGACATCGTG CGCAAGCAGA TCCGGATTGC CGCCGGCGAG
CCGATTTCCA TCACTCAGAA GGACGTCACT TTTCGCGGGG TCGCCATCGA GCTTCGGATC
AATGCGGAAG ACCCGAAGAA CAACTTCATG GCAAGCCCCG GCGTGATTCA GATCTACCAG
TCGCCGGGAG GCCACGGGAC ACGCCTGGAC GGTGCGGTTT ACCAGGGCTA CGAGATTCCC
CGGTACTACG ATTCGATGCT GGTCAAGCTC ACCGTCTACG GATTCACGTG GCGGGAGGCG
GTGGACCGCC TGGACCGGAC CCTGAAAAGT TTTGCCATCG CCGGCGTGAA GACCACGATC
CCCTACTACA AGCAGATTGT GAAAGACCCG GATTTCATCG AGCAGCGGTT CGACACGTCC
TATATCGAGA CGCACCCTCA TCTTCTGGAC TACCAGGACG AGGTTCCCGA GTTGGAGAAG
CTGGCAAGCC TCGTTGCTGA GATCAATGCC CGCGGGTATA ATCCTTATGC CTAG
 
Protein sequence
MFKKLLVANR GEIAIRIIRS AQELGIKTVA VYEETDKTAM HIMRADEAVC LGSGPRKDYL 
NIDRIVQAAL STGAEAIHPG YGFLAENPMF SKKCTDAGLV FVGPPPQVII DMGNKVVARR
IMKNAGIPVI PGTDILEEGE LGEQDAVDFA EEYGFPIMVK AVAGGGGRGI RVATNVGELI
KGLKMARSEA RMAFGNDDIY LEKGLGNPRH VEVQIVADRF GDVIHLGTRN CSIQRRHQKM
IEIAPASLPA DLSENVCRTA VKAAKACNYV NAGTVEFLLD EADNYYFLEV NTRIQVEHTI
TEMITGIDIV RKQIRIAAGE PISITQKDVT FRGVAIELRI NAEDPKNNFM ASPGVIQIYQ
SPGGHGTRLD GAVYQGYEIP RYYDSMLVKL TVYGFTWREA VDRLDRTLKS FAIAGVKTTI
PYYKQIVKDP DFIEQRFDTS YIETHPHLLD YQDEVPELEK LASLVAEINA RGYNPYA