| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0651 |
|---|
| Symbol | |
|---|
| ID | 4460412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 782815 |
|---|
| End bp | 784539 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639701407 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_844785 |
|---|
| Protein GI | 116748098 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.932152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGG AATGGCCGAC GAAGGTTCGA CTGCTTGATT TTCCGGAAGG CGGGGAATCC
CCGGAGCGCT ACCGGTTGCT TCGCAGGAAC ATGATCATCC TGATGATCCT GGTCACCATC
TTTCCCCTGT TTTTCATGGC CGTGGTGAAC TATCACCAGT ACCAGACGTC GCTCAAGGAC
GAAATCCTCA ATCCTCTGCG GGTGCTGGTG GACAAGACCC GGCATTCTTT CGAGCTGTTC
CTGGCCGAAC GGCTGTCCGC CGTCAGTTTC ATCGCTTCGG CCTACAGCTT CGATCAGTTG
GCCGACGAGA ATACCCTGAA TCGGATTTTC ACGGTGACGC GGCAGGAATT CGGCGGATTC
GTCGACCTGG GGCTCATCGA CGGAAATGGA GTGCAGGTCA GCTACGTGGG GCCTTACGAG
CTGAAAGGTA AGAACTATCA TGAACAGAGC TGGTTCCACG AAGTGCAGAT CCGCGGAAGT
TATATCAGCG ACGTGTTCAT GGGCTACCGG AAATTTCCGC ATATCGTGAT CGCCATCCAG
AAACGCAACA ACGAGGGCAG GATCTGGATC CTGCGCGCAA CCATAGACAC GGAGAGGTTC
AATGACCTGA TCGCCTCCAT GCGCCTCGAC CCGAGAAGCG ACGCCTTTCT GCTCAACAGG
AGCGGCATTT TTCAAACTCC GTCCAAGTGG TACGGGGGAG TGCTCGAACC CTTTCCGATG
CCTCTGCCTC CGTTCACCAA CGAGGCGACC GTGCTCGAGG AACAGGACAC GCAGGGCAGG
CAAATACTGC TGGCCTACAC CTACTTTCCC CATTCTCCGT ACATCCTCGC AGTCGTGAAG
CCGAGGGCCG AGGTGCTGAG GGCCTGGACG ACTCTGAAAA CCGAGCTGTT CCTCGTGTTT
CTCGTGAGCG TGATCCTCAT CTTCCTGGTG GTGTTTCGGT TGACCAACGT GATGGTGAGG
CATTTGCGGG AGAGTGACGA ACGCAGGGAG GCGGCGTTTC GGGAGATGCA GCACGGCCAC
AAGCTCTCCT CCATCGGGCG GCTGGCCGCC GGGGTGGCTC ACGAGATCAA CAATCCCATG
GCCATCATCA ATGAAAAAGC AGGCCTGATG AAAGACCTGA TCGGCTATGG GGCGGACTTT
CCCGAAAAGG CGAAATTCCT TTCCCTCATC GATTCGATCC TGAATTCCGT GCACCGCTGC
CGGTCCATCA CGCATCGGCT GCTCGGATTC GCCCGCCGGA TGGAAGTGCA TATCGAGACG
CTGGATCTGA ACGAAGTGAT CCGGGAAACC TTCTCTTTCC TGGAAAAGGA AGCGCTTTAC
CGGAACCTCG AGATCAAAAT GGAACTGGCG GAGAGCCTGC CCCGCATTGC ATCCGACCGG
GGCCAGCTGC AGCAGCTGTT CCTGAATCTC TTGAACAACG CGTTTGCCGC CGTGGAAGAC
GGGGGCAGGA TTTCCGTGAC TTCATGGGAG CATGACATTG ATACCCTTGC CGTTTCCATT
CAGGACAACG GCTGCGGCAT GTCGCCGGAG ACGATCAAAC ATATTTTCGA ACCGTTTTTC
ACGACCAAGA AGGGGAGCGG AACGGGCCTT GGCCTTTCGA TCACCTACGG GATCGCGAAA
CGGCTCGGCG GCGACATCCA GGTGCAGAGC GAGGTAGGGC ATGGAACCAC GATGACCGTG
TACCTGCCCC GAAAATCCGC GGAGGATCTT CAGGATAGCA AATGA
|
|---|
| Protein sequence | MKWEWPTKVR LLDFPEGGES PERYRLLRRN MIILMILVTI FPLFFMAVVN YHQYQTSLKD
EILNPLRVLV DKTRHSFELF LAERLSAVSF IASAYSFDQL ADENTLNRIF TVTRQEFGGF
VDLGLIDGNG VQVSYVGPYE LKGKNYHEQS WFHEVQIRGS YISDVFMGYR KFPHIVIAIQ
KRNNEGRIWI LRATIDTERF NDLIASMRLD PRSDAFLLNR SGIFQTPSKW YGGVLEPFPM
PLPPFTNEAT VLEEQDTQGR QILLAYTYFP HSPYILAVVK PRAEVLRAWT TLKTELFLVF
LVSVILIFLV VFRLTNVMVR HLRESDERRE AAFREMQHGH KLSSIGRLAA GVAHEINNPM
AIINEKAGLM KDLIGYGADF PEKAKFLSLI DSILNSVHRC RSITHRLLGF ARRMEVHIET
LDLNEVIRET FSFLEKEALY RNLEIKMELA ESLPRIASDR GQLQQLFLNL LNNAFAAVED
GGRISVTSWE HDIDTLAVSI QDNGCGMSPE TIKHIFEPFF TTKKGSGTGL GLSITYGIAK
RLGGDIQVQS EVGHGTTMTV YLPRKSAEDL QDSK
|
|---|
| |