Gene Sfum_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0646 
Symbol 
ID4460407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp777075 
End bp777530 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content56% 
IMG OID639701402 
ProductUspA domain-containing protein 
Protein accessionYP_844780 
Protein GI116748093 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCT TGGTTCCCGT AGACGGTTCC GCGCATTCGT TGGAAGCGCT CAAAGTCGCC 
GTCGATTTCG TCAAGTGCAA GGGCGCTGAG GTGTATGTTA TCAGCGTAGT CCCTTTCATC
GGCGGTATGG AAGACCATGA GATCTCTCCC AAGCGGAGGG AAAGAACCAT GGAAAGCATC
GAAAACCTGG CGAACACAGC CGTGAAGCAG GCCCTGGAGG TCCTTGACGC CCAGAACGTC
GTTCCCACCG GGTCAAAAAC CGTGGCGACC TCCATCTCGG TTCCCGACGC GATCATCGAT
TTTGCGGAAA CGGAGAAAAT CGACCTCGTT ATCATGGGAA GCCGGGGGTT GAGCACTTCA
TCCCGTTTCA AGCTCGGGAG CGTGGCCTCC CAGGTCATGA AATACAGCCC CTGCTCCGTG
TACCTCGTCA AAATGCCGGC GGAAAGGACG TCGTAG
 
Protein sequence
MKVLVPVDGS AHSLEALKVA VDFVKCKGAE VYVISVVPFI GGMEDHEISP KRRERTMESI 
ENLANTAVKQ ALEVLDAQNV VPTGSKTVAT SISVPDAIID FAETEKIDLV IMGSRGLSTS
SRFKLGSVAS QVMKYSPCSV YLVKMPAERT S