Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0646 |
Symbol | |
ID | 4460407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 777075 |
End bp | 777530 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639701402 |
Product | UspA domain-containing protein |
Protein accession | YP_844780 |
Protein GI | 116748093 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCT TGGTTCCCGT AGACGGTTCC GCGCATTCGT TGGAAGCGCT CAAAGTCGCC GTCGATTTCG TCAAGTGCAA GGGCGCTGAG GTGTATGTTA TCAGCGTAGT CCCTTTCATC GGCGGTATGG AAGACCATGA GATCTCTCCC AAGCGGAGGG AAAGAACCAT GGAAAGCATC GAAAACCTGG CGAACACAGC CGTGAAGCAG GCCCTGGAGG TCCTTGACGC CCAGAACGTC GTTCCCACCG GGTCAAAAAC CGTGGCGACC TCCATCTCGG TTCCCGACGC GATCATCGAT TTTGCGGAAA CGGAGAAAAT CGACCTCGTT ATCATGGGAA GCCGGGGGTT GAGCACTTCA TCCCGTTTCA AGCTCGGGAG CGTGGCCTCC CAGGTCATGA AATACAGCCC CTGCTCCGTG TACCTCGTCA AAATGCCGGC GGAAAGGACG TCGTAG
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Protein sequence | MKVLVPVDGS AHSLEALKVA VDFVKCKGAE VYVISVVPFI GGMEDHEISP KRRERTMESI ENLANTAVKQ ALEVLDAQNV VPTGSKTVAT SISVPDAIID FAETEKIDLV IMGSRGLSTS SRFKLGSVAS QVMKYSPCSV YLVKMPAERT S
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