Gene Sfum_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0642 
Symbol 
ID4460386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp771683 
End bp773161 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content60% 
IMG OID639701398 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_844776 
Protein GI116748089 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.400591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC GTGTCGGTTT GCGGGGCGGA ATCCTGACGG TGATCGTTTT GCTCGTGTCG 
GTGACCATTG CCTCGAGCCT GTTGGGCATC TGGTGGATAC GGCGCGCCAC CTCGCTTTTC
GTCAATTCCA TTGACACGAG CGTGGCGGCC GTGAACGTCA CCCAGGAGCT CGAAACGGCT
CTGGCCATGC AGAGGGGGTT GTTGAGCTAC TATTTCCTGG ACGGGAACGC CGAGTGGCTG
ACCCAGCTGG ATCATCACCG TTTGGGATTC GAGGAATGGC TGAAGAAGGC GAGGGAGCTG
TCCCGTTCGG ACAGGCACCA TGAGCTGCTC AACGAAATCG AGTCCAAGTA CGTTCGTCAT
AACGGCGCAA GGGACCAGGC GATAAGCCTC TATGATTCCG GGAACAGGGA TGGCGGCCTG
AAGCTCGTCC GGGAAACCCG CAATCCCTTC TATTCCGTAA GGGAGCTTTG CGAGCAGTAC
AAACAGATGC AGTACCGCGA AATATCCCTG GTGAGGACAA ACATCCTGGA ACGGATGAGC
CTCCTGCGTT CCATTTCCTT CGCGGTCATG GGTTTGGGGA TCGCGCTCGG CCTTGGGCTT
GTGATCCTGA TTCACAGGCG GATCCTCGAG CCCATCGGCC GGCTGGCCGT CGAGACCGGA
CGAACGGGTT CCCGCCCCGC CGATGAGGTG AAAGCTCTGG CGGAGAATGT GCACGGGCTG
CTCAAGGACG TGGACCGGAC CCAGACCCAG TTGCAACAGA GCAGGGAGCA TCTGCTCCAG
TCCGAGAAGC TGGCCCTCGT GGGGAAACTG GCGGCAGGGG TGGCGCACAG TATCCGCAAC
CCGTTGACAT CGGTGAAGAT GCGCCTTTTC ACGATGGAAA GGACCCTCGA CCTGTCCTCC
AACCAGAAGG AGGACTTCGA CGTGATCTCC GATGAGATTC GTCACATCGA CAACATCCTG
CAAAACTTCC TTGAGTTCTC ACGGCCTCCG AAGCTTAAGA TGCAGCGGAT CAGCCCGTCC
GATGTCGTGG ACATGGCGAT CCAGTTGCTG CGGCACCGGA TCGAATCTTA CGGGGTCACG
CTCGAGCTTT ACCGGCAGCG CCGGCTGCCG GAGATCGAGG GGGATCCCGA GCAACTCAAG
GAAGTCCTGG TGAACCTCAT CGTCAACGCC TGCGAGGCGA TGGGGGATGG AGGGAAGATC
CTGATCCGCG AGGAGGAGGG GGTCACCGAA CCGCAGGGGC GCGTGGCTGT GGTGCGCGTG
AGCGACAATG GGCCCGGGAT CCCGGAGGCT ATCCGGGAGA AGGTGTTCCA GCCCTTTTTC
AGCACCAAGG AGGAGGGCAC CGGGCTGGGG TTGAGTATTG CCGCGAGGAT CATCGAGGAA
CACAAAGGCT GTCTCAATCT GCGGGCCCGG CAGAGCAAGG GGGCCACGTT CATCATTACG
CTTCCGTGTA AGGAGGACGG CGCTTGGCTG CGATCCTGA
 
Protein sequence
MINRVGLRGG ILTVIVLLVS VTIASSLLGI WWIRRATSLF VNSIDTSVAA VNVTQELETA 
LAMQRGLLSY YFLDGNAEWL TQLDHHRLGF EEWLKKAREL SRSDRHHELL NEIESKYVRH
NGARDQAISL YDSGNRDGGL KLVRETRNPF YSVRELCEQY KQMQYREISL VRTNILERMS
LLRSISFAVM GLGIALGLGL VILIHRRILE PIGRLAVETG RTGSRPADEV KALAENVHGL
LKDVDRTQTQ LQQSREHLLQ SEKLALVGKL AAGVAHSIRN PLTSVKMRLF TMERTLDLSS
NQKEDFDVIS DEIRHIDNIL QNFLEFSRPP KLKMQRISPS DVVDMAIQLL RHRIESYGVT
LELYRQRRLP EIEGDPEQLK EVLVNLIVNA CEAMGDGGKI LIREEEGVTE PQGRVAVVRV
SDNGPGIPEA IREKVFQPFF STKEEGTGLG LSIAARIIEE HKGCLNLRAR QSKGATFIIT
LPCKEDGAWL RS