Gene Sfum_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0626 
Symbol 
ID4461688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp753553 
End bp754623 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID639701382 
Producthypothetical protein 
Protein accessionYP_844760 
Protein GI116748073 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGC TCTATATTCT CATGCCCATT GCGGGCGTCA AGATTTTCTG GCCCGGCTTG 
ATCATTCTCG GCATCGGTGT CGGTGTCATT GGCGGTTTCT TCGGAATGGG CGGCGCGTGG
ATGGTCACCC CCGGACTCAA CATCCTCGGC TTTCCCATGG CATTCGCCAT TGGCACCGAC
ATCGCCCATA TGGCCGGCAA GTCGCTGATT TCGACCATGC GCCACGGCAA GTTCGGAAAC
GTCGATTACA AGCTCGGCAT GATCATGCTG GTCGGCACGG TGATCGGTTT CGAGATCGGG
GCCCAGATGA TCATGTGGCT GGAGCGGATC GGCAGCGTGG AACTGGTGGT GCGCTGGCTC
TACATCCTGC TGCTCATGTT GATCACGTAC ATGGTGTTCG GCGACGTGCT CAAGAGGAGG
AAGAAGGAGA AGGAAGCAGC CGCAGCCGGC AAGGAGCTCG ACAAGCTGGC CACCGGTCTC
GAGTGGCATA AGACGTTTCA CAAGATCAAG ATCCCCCCGA TGATCCATTT GGACGTCGCC
GGCATCTACT GTTCCGCGTG GCTGCCCATC ATGGTCAGTT TCCTCACCGG CTGGCTGGCC
GGCATTCTCG GGATCGGCGG CGGTCTCATC CGCATGCCGT CCCTGATCTA CATCGTTGGT
TGTCCGACTC ACGTGGCGGT TGGAACGGAT CTCTTCGAGG TCATGATCTC CGGACTCTAC
GGCGCGGCCA CCTACACGTA CAAGGGCAGG ACCGAACTGG TGGCGGCCAT CATCATGCTG
ATCGGGGCCG CGATCGGAGC ACAGATCGGA ACGGTCGCGA CCAAGTACAT CAAGGGTTAC
GGAATCCGGA TCGCGTTCGG CTGCGCCGTC ATCGGTTGCG CCATTTCCGT GGCTCTCAAG
CTCATACCCA CATACTTCCC CCAATCGAAG GCCTTCTGCG ACGTTGCCGC CACGTTCTTC
GTGCTGGCCG TTGTCAGTGC CCTGTCCCTG TACATCATGG TCAAAATGGT CCAGGGCGCC
AAGCAGGAAG TGGCCCAGAA GAGAAAGAAG GCTGCCGCTA TCGCGAGCTA G
 
Protein sequence
MDWLYILMPI AGVKIFWPGL IILGIGVGVI GGFFGMGGAW MVTPGLNILG FPMAFAIGTD 
IAHMAGKSLI STMRHGKFGN VDYKLGMIML VGTVIGFEIG AQMIMWLERI GSVELVVRWL
YILLLMLITY MVFGDVLKRR KKEKEAAAAG KELDKLATGL EWHKTFHKIK IPPMIHLDVA
GIYCSAWLPI MVSFLTGWLA GILGIGGGLI RMPSLIYIVG CPTHVAVGTD LFEVMISGLY
GAATYTYKGR TELVAAIIML IGAAIGAQIG TVATKYIKGY GIRIAFGCAV IGCAISVALK
LIPTYFPQSK AFCDVAATFF VLAVVSALSL YIMVKMVQGA KQEVAQKRKK AAAIAS