Gene Sfum_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0619 
Symbol 
ID4461681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp746387 
End bp747328 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content58% 
IMG OID639701375 
Producthistidine kinase 
Protein accessionYP_844753 
Protein GI116748066 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG TTGAAAATTT TATGGCTCTC CGACGCGCCT GGTTTCCATA CCTGATCGCC 
CTGCTGATAG CGGGGCTCGG CGTGCTTCTC TGGATCAAGG CCGGCCCCGA ATTCGGTCTG
ATTTCCCTAC CCGTGTTGTG CTGCGCGTTT TTACTCACCC GAAAACTGGT GCTGCAGCTG
GCAAAGGCGA ACGAGCAGAA ACTGTCCCTG GATCGACAAC TCATCCAGTC GCAGAAGCTT
GCCGCCATAG GCGAGCTTTC CTCCGGAATC GCCCATGAAA TCAACAATCC GTTGGCGATC
ATCGGGCAGG AAGTCGAATG GATGAAGCAC CAGGCAAAGG ATGCGGGCAC GGGCGGAGGC
GGAAACCTGG CGGAATTCCT CGACTCCCTT ATGGAAATAG GCAAGCAGGT CGACCGCTGC
CGGGAAATCA CGCATAAGCT CCTGGATTTT GCCAGAAAGC GGGAACCTCT CATCCAGACG
ACGGACATCA ACAAGCTGGT CGAGGACATG GTGCGACTCG TGGAGAGGGA GGCCGTCAAG
CGCAAGATCA AGATCGACAG AGACTACCAG CCCGACTTGC CGGTGGTGCA GACCGATGCT
CCACAGCTCA GGCAGGTGGT CCTCAACCTG CTGATCAACG CCAATGCCGC GATCGATGCG
GGCGGGTGCA TCACCGTCGC CACGAGGGTC GTGGACAACG GATACGTGGA GCTTTCGGTG
AGCGACACCG GCTGCGGCAT TCCCGAAGAG AACAGGGACA AGATTTTCGA CCCTTTCTTC
ACCACCAAGC CCCCGGGGAA AGGCACGGGA CTCGGGCTTT CCATCTGCCA TGGGATAATC
ACCAAACTGG ACGGCCGGAT CACGGTGGCC AGTGAAGTCG GAAAGGGAAC GACCTTTGCG
GTGCGGCTTC CGGTCGGTCG CAGGAAAGGA ACAACGGGAT GA
 
Protein sequence
MKIVENFMAL RRAWFPYLIA LLIAGLGVLL WIKAGPEFGL ISLPVLCCAF LLTRKLVLQL 
AKANEQKLSL DRQLIQSQKL AAIGELSSGI AHEINNPLAI IGQEVEWMKH QAKDAGTGGG
GNLAEFLDSL MEIGKQVDRC REITHKLLDF ARKREPLIQT TDINKLVEDM VRLVEREAVK
RKIKIDRDYQ PDLPVVQTDA PQLRQVVLNL LINANAAIDA GGCITVATRV VDNGYVELSV
SDTGCGIPEE NRDKIFDPFF TTKPPGKGTG LGLSICHGII TKLDGRITVA SEVGKGTTFA
VRLPVGRRKG TTG