Gene Sfum_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0617 
Symbol 
ID4461679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp744128 
End bp745801 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content56% 
IMG OID639701373 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_844751 
Protein GI116748064 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.543989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGAA TGGAAGACAG AAGCTACCGA AAACTGCACT GGAAAATCGT AGCGACGACG 
TTGAGTTTCT CGCTCGTGCC CCTTTTCGTG GTCGGATTCA GCATCTACTA CCAGTTCAGC
GTTTCCTACA AGGCCAAGGT CATGGAGAGT CTCAGAACGC TGACGGAGAA CAGGGCCAAC
GCCGTCGATC TCTTTCTGGA CGAGCGCGTG TCGCAGCTGA ACACCCTGGT GTACACCAAC
TCCATCGATC AACTGGGGGA TGAAAGATAC CTGACGAGAG TCTTCACGCT GCTGCAGATG
CGATCGAAGT CGTTCGTCGA CGTGGGCATC ATCGACGCCG AGGGCAATCA CGTGGCCTAT
GTCGGTCCGT ATCAGCTCAA AGGTCTGAAC TACAGGAACG AAGAGTGGTT CGGAGAGACG
ATGCTCCGGG GAATCTACAT CAGCGACGTC TTCACCGGGT TCCGGAAATT CCCGCATTTC
GTGATCGCGA TCATGCGTCG CGAGGGAGAG AAGACCTGGA TTTTGCGGGC GACCATCAAC
ACGGACATCT TCGAAGCCAT GGTGAAGGCG GCGCAGATCG GGATGAAAGG CGATGCCTTC
CTGATGAACA AGGACAACAT CCTGCAAACT TCACCGCGTT TCGGCGGGGA GCTTCTCGGC
AAGGTCGGCT ACCCGATTTT CCCGAAGTTT CAGGGAGCGC GCGTGGAAGA AACGGAGCTC
GGCGGCGAGG AAGCCCTGTA CGGGATCGTG TGGCTCAAGG ACAAACAGTG GCTTCTTGTC
ATCAAGGAGG ATCCCCTGGA GAATCTGACG CCGATCCTGA GGACCCGGGT GCTGGTGATC
GCCCTGGTGC TGGGTGGGGT GCTGGTGATC GTCATGGGGA CGCTCCTGGT CAGCAACGCC
GTGGTGCGGC AACTGGTCAA GACGGACCGT GAAAAAGCGG CGCTGGATGC GGGGCTCGTG
CAGTCGAGCA AGATGGCCGC GCTGGGAAAG CTCGCTGCGG GGATTGCCCA CGAGGTGAAC
AACCCGCTTG CCGTGATCAA AGAAAAGGTC GGCTGGATGA AGGACCTTTT GAGCGAAGAA
GATGTCGAGG CAAGTGAGAA CTTCAAGGAA TTTGACGATG CGGTGAAAAA GATCGATTAT
CATGTGGAAC GGGCCAGAAA AGTGACGCAT CGCCTGCTCG GGTTCGCCAG GCGCATGGAA
CCCATCCAGG AACAGGTGAC CATGAACCGG GTGATCGAGG AGACCGTCGA CTTTCTGAAA
AACGAGGCGC ACTATCGAAA CATCGAGATC CGCACGACGC TCGATCCCGA TATGCCAACG
ACTACGAGCG ATTCATCTCA ACTCCAGCAG GTTTTCCTCA ATATCCTCAA CAACGCCATC
GATGCGATCG GGAAGAACGG CGTCATTACC ATATCGACCG GATATGATCT CAAGAACAGG
GAGTTGAGCG TTTCCATCGC CGATGACGGA CCGGGCATTC CGAGCGAAGT GCTGGGCAGG
GTTTTCGACC CCTTTTTCAC CACCAAGGAA GTCGGCAAGG GGACGGGACT CGGGCTTTCC
ATCAGCTATT CCATCGTTGA AAAACTGGGA GGCACAATCA AGGTGGCAAG CCAGGTCGGC
AAGGGGACCA CGTTTTCCAT TCACTTGCCT ATCGTCAACC ATGCGACGGC CTGA
 
Protein sequence
MMRMEDRSYR KLHWKIVATT LSFSLVPLFV VGFSIYYQFS VSYKAKVMES LRTLTENRAN 
AVDLFLDERV SQLNTLVYTN SIDQLGDERY LTRVFTLLQM RSKSFVDVGI IDAEGNHVAY
VGPYQLKGLN YRNEEWFGET MLRGIYISDV FTGFRKFPHF VIAIMRREGE KTWILRATIN
TDIFEAMVKA AQIGMKGDAF LMNKDNILQT SPRFGGELLG KVGYPIFPKF QGARVEETEL
GGEEALYGIV WLKDKQWLLV IKEDPLENLT PILRTRVLVI ALVLGGVLVI VMGTLLVSNA
VVRQLVKTDR EKAALDAGLV QSSKMAALGK LAAGIAHEVN NPLAVIKEKV GWMKDLLSEE
DVEASENFKE FDDAVKKIDY HVERARKVTH RLLGFARRME PIQEQVTMNR VIEETVDFLK
NEAHYRNIEI RTTLDPDMPT TTSDSSQLQQ VFLNILNNAI DAIGKNGVIT ISTGYDLKNR
ELSVSIADDG PGIPSEVLGR VFDPFFTTKE VGKGTGLGLS ISYSIVEKLG GTIKVASQVG
KGTTFSIHLP IVNHATA