Gene Sfum_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0604 
Symbol 
ID4460743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp728402 
End bp729118 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content57% 
IMG OID639701360 
Producthydrolase 
Protein accessionYP_844738 
Protein GI116748051 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGC GCATTGCGCA ACGGATCGGC AAGATGGAAA TGGTGAAACG ACAGCGGACG 
GATGTGGTTT TCCCGGCCCC ACCAAAGGTG GTCGCCTTCG ATTGCGACGG TGTGCTCTTC
GATTCCAGGG AAGCGAATAT TCACTTCTAC AGCCACATCC TGGAACAGGT GGGCCGGCCC
CCGGTGCGTC CCGACCAGGT CGAATTCATC CACATGCACC CGGTTCGCGA ATCGCTGATG
TACCTTCTCG AGGACGGACC GTTGTTCGAC GAGGCGTACC AGTACTTCAA AAAGATCGAT
TTCACTCCGT TCGACACCTA TCTGCGCATG GAGCCCGGCA TCGAGAACGC GCTCCGGTTC
GCCAAGTCGC ATTTTCTAAC GGCCCTGGCC ACGAACCGTA CGGTTTCCAC CCTCGAGCTT
CTGGCCCGCT ACGGACTGCG CAAGTATTTC GATCTTGTCG TTTCCGCATC CGACGTCGAT
CACCCGAAAC CCCACCCCGG GGAGATGGAC CGAATTCGTG CATTCTTCCG GGTCGGCGCC
GAAGAAATCG TGTACGTAGG GGATTCCACC GTCGACGAAG AGTTCGCCGC CAACACCGGA
GTTTTCTTCG TCGCCTACAA GAACCGTCGC CTGAAGGCAC ATTACTACAT CGATCACCTG
AAGGACCTCA CGGTTCTGCT GGAATCCTGC CGAAGCGAAT CCGCCAACGG AACGTAA
 
Protein sequence
MNSRIAQRIG KMEMVKRQRT DVVFPAPPKV VAFDCDGVLF DSREANIHFY SHILEQVGRP 
PVRPDQVEFI HMHPVRESLM YLLEDGPLFD EAYQYFKKID FTPFDTYLRM EPGIENALRF
AKSHFLTALA TNRTVSTLEL LARYGLRKYF DLVVSASDVD HPKPHPGEMD RIRAFFRVGA
EEIVYVGDST VDEEFAANTG VFFVAYKNRR LKAHYYIDHL KDLTVLLESC RSESANGT