Gene Sfum_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0598 
Symbol 
ID4460736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp723187 
End bp723831 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID639701354 
Productsignal peptidase I 
Protein accessionYP_844732 
Protein GI116748045 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA CCCCCATTCC CACGGACCGG AAACCCCGCC CCAGGCAGGC GGTCATCTGG 
GAATACACCC GTTCGATCCT CCTGGGCGTC GTTCTCGCCC TGCTGATCAG GACCTTCATC
GTGCAGGCCT ACGAGATTCC CTCGGGGTCC ATGGAAGACA CCCTGGCCAT AAACGACCAC
ATCCTCGTCA ACAAGTTCAT CTACGGCACG AAAATCCCCT TCACCGACCT GCGAATCCTC
GAATGGCGCG AACCGGCCCG CGGGGATGTC GTCGTTTTCG AATACCCCCT GGACCCGAGC
AAGGACTACA TCAAGAGGAT CATCGGGTTG CCGGGCGACC GGATCCGGAT TGCCGACCGT
CAGGTCTACA TCAACGGCCA ACTCTACGAG AATCCCCACG CGATCCACAA GGGACGCGAA
ATCGTACCGA AGCTCGCATC GCCCCGGGAC AATACGGACC CCATCGTCGT TCCGCCGAAC
TCCTACTTCG TCCTGGGCGA CAACAGGGAC AATTCCTATG ACAGCCGGTT CTGGGGGTTC
GTGAGAAAAG ACCGGATCAA AGGCCTGGCC TTCATCAAGT ACTGGGCGTG GGATTCGGAG
CGCCACAGTG TGCGCTGGCG AAGCATCGGG GACGTGATCG ACTGA
 
Protein sequence
MTKTPIPTDR KPRPRQAVIW EYTRSILLGV VLALLIRTFI VQAYEIPSGS MEDTLAINDH 
ILVNKFIYGT KIPFTDLRIL EWREPARGDV VVFEYPLDPS KDYIKRIIGL PGDRIRIADR
QVYINGQLYE NPHAIHKGRE IVPKLASPRD NTDPIVVPPN SYFVLGDNRD NSYDSRFWGF
VRKDRIKGLA FIKYWAWDSE RHSVRWRSIG DVID