Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0598 |
Symbol | |
ID | 4460736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 723187 |
End bp | 723831 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639701354 |
Product | signal peptidase I |
Protein accession | YP_844732 |
Protein GI | 116748045 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA CCCCCATTCC CACGGACCGG AAACCCCGCC CCAGGCAGGC GGTCATCTGG GAATACACCC GTTCGATCCT CCTGGGCGTC GTTCTCGCCC TGCTGATCAG GACCTTCATC GTGCAGGCCT ACGAGATTCC CTCGGGGTCC ATGGAAGACA CCCTGGCCAT AAACGACCAC ATCCTCGTCA ACAAGTTCAT CTACGGCACG AAAATCCCCT TCACCGACCT GCGAATCCTC GAATGGCGCG AACCGGCCCG CGGGGATGTC GTCGTTTTCG AATACCCCCT GGACCCGAGC AAGGACTACA TCAAGAGGAT CATCGGGTTG CCGGGCGACC GGATCCGGAT TGCCGACCGT CAGGTCTACA TCAACGGCCA ACTCTACGAG AATCCCCACG CGATCCACAA GGGACGCGAA ATCGTACCGA AGCTCGCATC GCCCCGGGAC AATACGGACC CCATCGTCGT TCCGCCGAAC TCCTACTTCG TCCTGGGCGA CAACAGGGAC AATTCCTATG ACAGCCGGTT CTGGGGGTTC GTGAGAAAAG ACCGGATCAA AGGCCTGGCC TTCATCAAGT ACTGGGCGTG GGATTCGGAG CGCCACAGTG TGCGCTGGCG AAGCATCGGG GACGTGATCG ACTGA
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Protein sequence | MTKTPIPTDR KPRPRQAVIW EYTRSILLGV VLALLIRTFI VQAYEIPSGS MEDTLAINDH ILVNKFIYGT KIPFTDLRIL EWREPARGDV VVFEYPLDPS KDYIKRIIGL PGDRIRIADR QVYINGQLYE NPHAIHKGRE IVPKLASPRD NTDPIVVPPN SYFVLGDNRD NSYDSRFWGF VRKDRIKGLA FIKYWAWDSE RHSVRWRSIG DVID
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