| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0593 |
|---|
| Symbol | |
|---|
| ID | 4460299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 719119 |
|---|
| End bp | 720249 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639701349 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844727 |
|---|
| Protein GI | 116748040 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.356961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.748294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATAC CCTCCCAGTC TGATTACGAG TTCGAGCAGC GGGTGGCCTC CCGCTTTATG
GATATCCTGA TCCGTGCCGG CCTGATCCTC GTCCTGGCCA TGCTTTGCTA CCAAGTGCTC
TCCCCGTTCC TGACGCTGAT GGTCTGGGCG CTCATTCTGG CCGTTACGAT CTTTCCCCTC
CACCAATTCC TGGCGGGCAG GATCGGGGGC AGGCAAGGAC TTGCCGCAGC CCTGCTGGTC
ATCGTCGGCC TCATGCTGAT CGTTGTGCCG ACGGCGATGC TGATGAGTTC ACTTGGCGAT
TCGGTGCATC AGCTGGTCAA CGACGTGCAG AACAACTCGC TGAAGATTCC GGCACCGCGT
CCCGGCGTGG AGGGATGGCC GGTCGTCGGC AAGAAGGTCC ACGACATCTG GTCCAGGGCA
TATGCCGACC TGCCGGCACT GGTGCAGAGC ATGCAGCCGA AGATTGGAGA ACTGGCGAAG
ACAGCACTGG GCTTCGTCGC CGGCATCGCC GGTGGATTGT TGCAGTTCAT AGCCTCGTTC
ATCGTCGCCG GCATCATCAT GGCCTTCGGG CAGTCGGGCG GTCGCGGCAG CCTGGCGATC
TTCGAGCGCA TCGTCGGCAG AGAGCGAGGC GGCGAATTTG CGAGACTGTC CACGTCGACC
ATTCGTGCCG TCTCCCAGGG GGTCATCGGT GTGGCCTTCA TTCAGGCCAT CATCGTCGGC
CTGGCTCTGC TGGTCTCCGG GGTCCCGTGG GCGGGTGCGC TTGCGTTGAT CGTGCTGGTT
CTCGGTATCG CCCAGATTCC GGCGTTGATC GTGACCCTGC CCGCAATCGT GTACATCTGG
ATGAGCGGTC ATTACGGCAA CGCGGCAGCG GTTGCTTACA CGGTGGTGTT GATCCTCTCG
GGAATGACGG ACAACGTGCT GAAGCCGCTG ATGCTGGGAA GGGGGGTCGA TGCTCCGATG
CCGGTGATCC TGCTCGGCGC GCTGGGCGGC ATGGGGACCG CCGGGATCCT GGGGATGTTC
GTCGGCGCCA CCTTGCTGAC GCTGGGCTAC CAGGTCTTTA TGGGTTGGGT GGCGGCCAAC
CCGGATGCCG GGCAGGCGCA GGCGGAAAGC GAGTCGCAGC AGGCGGGCTA A
|
|---|
| Protein sequence | MNIPSQSDYE FEQRVASRFM DILIRAGLIL VLAMLCYQVL SPFLTLMVWA LILAVTIFPL
HQFLAGRIGG RQGLAAALLV IVGLMLIVVP TAMLMSSLGD SVHQLVNDVQ NNSLKIPAPR
PGVEGWPVVG KKVHDIWSRA YADLPALVQS MQPKIGELAK TALGFVAGIA GGLLQFIASF
IVAGIIMAFG QSGGRGSLAI FERIVGRERG GEFARLSTST IRAVSQGVIG VAFIQAIIVG
LALLVSGVPW AGALALIVLV LGIAQIPALI VTLPAIVYIW MSGHYGNAAA VAYTVVLILS
GMTDNVLKPL MLGRGVDAPM PVILLGALGG MGTAGILGMF VGATLLTLGY QVFMGWVAAN
PDAGQAQAES ESQQAG
|
|---|
| |