| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0588 |
|---|
| Symbol | |
|---|
| ID | 4460294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 713860 |
|---|
| End bp | 715167 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639701344 |
|---|
| Product | anaerobic C4-dicarboxylate transporter |
|---|
| Protein accession | YP_844722 |
|---|
| Protein GI | 116748035 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATCG TTGAGCTGCT GGTTGTTCTT TTTTTCATCT GGCTCGGAGC GAGGCTCGGC
AGCATCGGGA TAGGATATGC CGGTGGTTTC GGAGTCCTTG TTCTGAGTCT TGGGTTCGGT
TTGAAACCGG GCGACATTCC GTTCGACGTC ATCCTTATCA TCATGGGGGT GATAGCGGCC
ATCGCAGCAA TGCAGGAGGC GGGGGGCCTG GAATACCTGG TGCAGGTCGC CGCAAGAGTC
CTCAAGAAAA ATCCTAAATA TATTACGTTC CTGGCGCCGG CCGTGACCTA TTTCATGACC
CTGTTTGCCG GCACCGGCCA TACCGCCTTT CTGGCCCTGC CCGTTATTGC GGAGGTTGCC
AAAAAGGAGG GGATACGCCC CTCGCGGCCG TTGGCCATCG GAACGGTTGC ATCGCAGATC
GCCATCACAG CCTCCCCCAT ATCCGCGGCG GTTGTCTTCG TTGCATCCGC GCTGGAACCG
GTCGGGGTCG ATTATGTCAA GCTCCTGCTC ATCACCATCC CCAGCACCTT CATCGCGTGC
ATGCTTGGGG CAATCATCAC CAATTTCATG GGAAAGGAAC TCAAGGATGA TCCCGTATAT
CAGGACCGCC TCGCCAAAGG GCTCGTCAAG GATCCCTCCG AATCCGTCGA AGAAAAGGTT
CTTCCCCCCG GGGCGAAACT TTCAGTCCTC ATTTTCGGTC TCGCCATCGT CTGCGTGGTC
TTTTACGCCA CGGCCATCAG CCCGACCGTG GGCCTGATCA AGAAGCCCAT TCTGGCCCGG
GACCATGCCA TCATCTCGTT CATGCTTGCC GCCGCCTCGC TCATTGCCTT GCTGTGCAAG
GTCAAGACGA ACAACATCGT GAACGCGGCC ACGTTCAAAT CCGGCATGAG TGCCTGCATT
TGCGTCCTGG GCGTCGCCTG GCTCGGGACC ACGTTCGTCT CGGCGCACCT CAAGGAAATC
AACATCCTCG CGGGAGACCT TCTGGCATCC AAGCCGTGGA TGCTTGCCGT CGTCCTGTTC
TTTGCGGCCA TGCTCCTTTA TTCTCAGGCG GCCACCGCCA AAGCCCTGAT GCCCGTTGCC
CTGGCGCTCG GAGTGAGTCC GGTGGCGGCC GTGGCGGCGT TTCCTTCCGT GAGCGCTCTT
TTTGTCCTCC CCACCTACCC CACGCTGCTG GCGGCGGTCG AATTCGACGA TACCGGTTCG
ACCCGGATCG GGAAATACGT CTTCGATCAC CCGTTCCTGA TCCCCGGCGT GCTGACCATC
ACCTTTGCGA TTGTTCTCGG TTATGTCTTC GGGCGCCTCA TTCTCTGA
|
|---|
| Protein sequence | MWIVELLVVL FFIWLGARLG SIGIGYAGGF GVLVLSLGFG LKPGDIPFDV ILIIMGVIAA
IAAMQEAGGL EYLVQVAARV LKKNPKYITF LAPAVTYFMT LFAGTGHTAF LALPVIAEVA
KKEGIRPSRP LAIGTVASQI AITASPISAA VVFVASALEP VGVDYVKLLL ITIPSTFIAC
MLGAIITNFM GKELKDDPVY QDRLAKGLVK DPSESVEEKV LPPGAKLSVL IFGLAIVCVV
FYATAISPTV GLIKKPILAR DHAIISFMLA AASLIALLCK VKTNNIVNAA TFKSGMSACI
CVLGVAWLGT TFVSAHLKEI NILAGDLLAS KPWMLAVVLF FAAMLLYSQA ATAKALMPVA
LALGVSPVAA VAAFPSVSAL FVLPTYPTLL AAVEFDDTGS TRIGKYVFDH PFLIPGVLTI
TFAIVLGYVF GRLIL
|
|---|
| |