| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0581 |
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| Symbol | |
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| ID | 4460287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 706395 |
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| End bp | 708641 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639701337 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_844715 |
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| Protein GI | 116748028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.401859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.981088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCCA TGGAGCATGC AGGGAAAGCC GCCGCATTTC TGTTTCTTGG ACTCCTGTTT
CTTGCGGTTT CTCACGGCTC ATCGGCATCG GTGCCCGTTA AGAGGATCTT GCTTCTCTTC
CCGTTTGAGA GCAGCGTGCC CGGGTTCATC AGTTACGACA ACAGCCTTCG ATCAACATTG
ACAGCCTCGA AGGATTACCA GTTCGAGTTC TACGTCGAAT GCATGGATCT GACGAGGTTC
ACGAGTAAGG ACTATCGCGA TAAGCTCGTC GGACTGTACC GCGAGAAATA CTCCGGCATC
GAAATCGACC TCGTTGTTGC CTTGCTGCGA CCATCTCTCG ATTTCGTGGC GGAACACAGC
CCCGAAACGT TTCAGAATGT CCCTGTCATT GTCGTCGAAC AGGACCCCAG GCTCCTTGGT
GACCTCCCAT CGACATCCCT TGCCGCGGTG GTGACCGGCA AGCTGGATAT GGAGGGGACG
CTGGCTCTCG CGCTCCGCCT GCATCCTGAC GCCCGCAAGG TTTTCGTTGT AAGCGGGGTC
TCGCGATACG ACGAATTGGT TCACGGATTG GCCAGGGAAG GCTTTCGCGG TTTCGAAAAC
CAGGTTGATC TCCAGTACCT CTCCGGGCTC CCCATGGATG AGCTCATCGA TCGAGTTGCG
AAGGTTCCCG AGCACTCCCT GGTGTTTTAC CTTACTGTCA CCCGGGATGG CAGCGGAAAG
ACCTTTAGGT CCCCCGAGGC TCTTGCCCTC TTGTCCAGGC AGGCGAACGC ACCCATTTAT
AGTATATCCG AAACATACAT CGATTACGGG ATTGTAGGCG GCCATCTTGT CAGTCAATCC
GTCCTGGGAG TCAGGACGGC CCAGGCAGTG CTTCGGACCC TCGGCGGGGA AAGGCCCGGC
GACAGGGAGT CTTCCGAGGG AGGTGCGAAT CGGTATATTT TTGACGCGCG CGAGCTCAAG
CGGTGGGGGG TCGGGGAGGA AAACCTCCCT CAAGGCAGCA TTCTGCGCCA CAGGGATTTT
TCCCTTTGGA GAGAATACCG GTGGCAGATC GTCGGGGTTT TTTTGATTGT CTTCATCCAG
GCGTTCCTCA TATCCGCCCT CTTCGTAAGT CGTGGGAAGC AGCTCCGGGC TGATCGCGCT
CTTCGAAACG CGGAATCGAA GTATCGGACA GTTGCCGACT ACACCTATGA TTGGGAGGAC
TGGTCGGCCC CGGATGGGAG CTTGAATTAT GTATCCCCCT CCTGCAAGCG CATTACGGGA
TACAGCCCGC AGGAATTTAT CGAAAACCCA TCTCTTCGCC ATGAGATCAT CATCCCGGAA
GATCGCCACA TCTGGGATCG ACACAAAGCG GGCATTGGAC CCGAATCGGA GTCGCGGGAA
ATTCAGTTCC GCATACTCAC CCGCGCCGGC GAAACCCGCT GGATAGACCA CACTTGCCGG
TCGGTAACCG ATCAGAATGG TGACTTCCTG GGTATCCGGG CAAGCAACAG GGATGTGACG
GAAAGGAGGA TGGCCGAAGC CAGGGTTCAG CGACACCGGG ACGAGCTTTC CCATATTTCG
CGGGTGGCCG CCCTCGGGGA GCTCGCCGGT TCTCTTGCTC ACGAGCTCAA TCAGCCCCTG
GCGGCGATAC TCAACTACGC CAACGCCGCA CGGCGATTTC TTGCCGCTGC CGAACCCAAT
TTGAGCAAAG TCAGCGAAGC CCTTCAAGGC ATCATCCGGG ATGAAAAAAG GGCGGCCCAG
GTGATCCGCG AAGTCCGGGC CTTGATTAGA AAGCAGGAAC CCCACTACCG TGCACTGAGC
ATAAACAAAG TCATCCGGAA ATCCGTCGAT CTCTTTCGAG GCGATTCGAT CCTGACGGGG
TTGTCTATCG TGACCGAGCT CGCGCCGGGG CTGCCCGCGG TTCGGGGCGA CGGGGTTCAA
CTGCAGCAGG TACTCATAAA CCTCACCTTG AATGCTGTTG CCGCCATGAG CGGTGTTCTG
CCGGATTCCC CCCGGCTGGT CTTCAGGACC GAGGCCTGGG AAGATCAGGG CGTGAAAGTC
TCAATCAGAG ATTTTGGCGC GGGCATTGAC GAGGATCATA AGGATCGGCT TTTTGAGCCG
TTTTACACGA CCAGACCCGA AGGGTTGGGA ATGGGGCTCG CCATCTGCCG AAACATTATC
GATGCTCATG GGGGCACGAT GGGGGCCGAG AATAATCCTG ACGGAGGAGC AACTTTCTAT
TTTACTCTAC AGGCTGCCGC AAGATGA
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| Protein sequence | MRSMEHAGKA AAFLFLGLLF LAVSHGSSAS VPVKRILLLF PFESSVPGFI SYDNSLRSTL
TASKDYQFEF YVECMDLTRF TSKDYRDKLV GLYREKYSGI EIDLVVALLR PSLDFVAEHS
PETFQNVPVI VVEQDPRLLG DLPSTSLAAV VTGKLDMEGT LALALRLHPD ARKVFVVSGV
SRYDELVHGL AREGFRGFEN QVDLQYLSGL PMDELIDRVA KVPEHSLVFY LTVTRDGSGK
TFRSPEALAL LSRQANAPIY SISETYIDYG IVGGHLVSQS VLGVRTAQAV LRTLGGERPG
DRESSEGGAN RYIFDARELK RWGVGEENLP QGSILRHRDF SLWREYRWQI VGVFLIVFIQ
AFLISALFVS RGKQLRADRA LRNAESKYRT VADYTYDWED WSAPDGSLNY VSPSCKRITG
YSPQEFIENP SLRHEIIIPE DRHIWDRHKA GIGPESESRE IQFRILTRAG ETRWIDHTCR
SVTDQNGDFL GIRASNRDVT ERRMAEARVQ RHRDELSHIS RVAALGELAG SLAHELNQPL
AAILNYANAA RRFLAAAEPN LSKVSEALQG IIRDEKRAAQ VIREVRALIR KQEPHYRALS
INKVIRKSVD LFRGDSILTG LSIVTELAPG LPAVRGDGVQ LQQVLINLTL NAVAAMSGVL
PDSPRLVFRT EAWEDQGVKV SIRDFGAGID EDHKDRLFEP FYTTRPEGLG MGLAICRNII
DAHGGTMGAE NNPDGGATFY FTLQAAAR
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