Gene Sfum_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0566 
Symbol 
ID4461217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp689051 
End bp689791 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID639701322 
Producthypothetical protein 
Protein accessionYP_844700 
Protein GI116748013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00270463 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGCC TGTCATGGAA AGTCTGCGTC GGATTGATTC TGGTGGCTTC GTCCCTGCTG 
CTCGGGATTA TCCATGTCGT CCTGTTCAAG GACCCTCAAA CCCTCCTCTT TTATCTTGTC
CTGGACATTG TGTTCGTCCC GGTGCAGGTT CTGCTCGTCA CCATCATCAT TGAACGGCTG
CTCAACGAAC GTGAAAAACA ATCCATGCTG AACAAGCTCA ACATGGTCAT CGGTGCTTTT
TTCACCGAAA CCGGAACCAC TCTCATCAAG CAGATGGGGC ACACCTGCAT GGACCTCCAC
GAACTGGAAC AGCACCTTGC CGTCTCCGAT GATTGGGACA ACACCCGGTA CGTGATCGCC
ATGCGACACA TCGAAGACTT CACATGTCGT TTCGGATTGC CCATCGAACA ATTGGAGCGG
TTGAAAGCAT TCCTGCTTTC GAAGAAAGGC TTCCTCCTGG GATTGCTGCA GAATCCGAAT
CTTTTGGAAC ATGACAGCTT CACCGACCTC CTCTGGGCCG TGTGCCACCT GAGCGAGGAA
TTGGAAGCAC GGGGAGACCT GTCCGGTTTG CCCCCCAGCG ATCTGAGGCA TATCGAAAAC
GACATCCGAA GGGCTTTCGG AATTCTGGTG CGGGAATGGC TGGTCTACCT GCACCATCTG
CGCAGCCACT ACCCCCACAT CCACTCGCTC CACGTCAGGA CAAACCCGTT CAACCCGCAG
GCCAGCCCGG TGGTTCAGTG A
 
Protein sequence
MVRLSWKVCV GLILVASSLL LGIIHVVLFK DPQTLLFYLV LDIVFVPVQV LLVTIIIERL 
LNEREKQSML NKLNMVIGAF FTETGTTLIK QMGHTCMDLH ELEQHLAVSD DWDNTRYVIA
MRHIEDFTCR FGLPIEQLER LKAFLLSKKG FLLGLLQNPN LLEHDSFTDL LWAVCHLSEE
LEARGDLSGL PPSDLRHIEN DIRRAFGILV REWLVYLHHL RSHYPHIHSL HVRTNPFNPQ
ASPVVQ