| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0565 |
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| Symbol | |
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| ID | 4461216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 687464 |
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| End bp | 688585 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701321 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_844699 |
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| Protein GI | 116748012 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.005662 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.744875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTTTC GGATCATCGC GCGCGATGCC TCCTGCCATG CACGGCGGGG CCGGCTGAGA
ACCGCTCATG GAACCTTCGA CACTCCCGTC TTCATGCCGG TCGGTACCCA GGCATCCGTA
AAAAGTCTCT CGCCGGATGA ACTGGAAGAT CTGGGCGCGC ACATCATCCT GGGGAACACC
TATCATCTGC TCCTGCGGCC CGGAGCCGAA CGGGTCGCCC GCCTGGGGGG GCTGCACCGG
TTCATGCACT GGAACCGTTC GATCCTCACC GACAGCGGGG GCTTCCAGGT CTTCAGCCTG
GCCCGGATCA ACCGGATCGA AGAGGATGGG GTTGTTTTCC AATCGCACAT CGACGGAGCC
CGTCACGCAA TTACCCCCGA AACCTCCATG GAATGCCAGA TGCAACTGGG CTCCGATATC
GCCATGTGCT TCGACGAATG CACTGCTTAT CCGGTCACCT ACGAATACGC CAGGGAATCC
ATGCTGCGCA CGGTGAGATG GGCGGCCCGG AGCAAAGAGG CCCACACGCT GCCGGAGCAA
TCGCTGTTCG GGATCGTCCA GGGCGGAGTC TTTTGCGATC TGAGGCGGGA TTGCCTGGAA
AGGCTCGTGG AAACAGGTTT CGACGGATAT GCCCTCGGCA GCCTCTCCGT CGGGGAATCC
AAAGAGGAGA TGCTGTCCGT GCTCGAAGCG GTGGCCCCCG GGCTCCCCGC CGCATCGCCC
CGATACGTCA TGGGGGTGGG GACGCCCGAA GACCTCGTGG AAGGCGTCCG CTGCGGAGTG
GACATGTTCG ACTGCGTCAT GCCCACGCGC AACGCTCGAA ACGGGATGCT CTTCACCGTC
CGCGGCGGCA TCCAGATCAA GAACAGCCGT TACGCCGACG ACGATCGTCC CATTGAGGAG
GGATGTTCCT GTTACACCTG CCGGCGATTT TCGCGGGCCT ACCTCAGGCA CCTGTTCCTG
GCCCGGGAGT TGCTCGCCTA CCGGCTGAAC ACACTTCACA ACCTCCACTA CTATTTGGGG
CTCATGGCGG CCATGCGCGA GGCCATCGAA GCCAATGCCT TCGATCGATG GCGCCGGTCT
TTCTATCTGG ACCGGGAAAA CAGGGAGCCG GCGGAGGAAT GA
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| Protein sequence | MDFRIIARDA SCHARRGRLR TAHGTFDTPV FMPVGTQASV KSLSPDELED LGAHIILGNT
YHLLLRPGAE RVARLGGLHR FMHWNRSILT DSGGFQVFSL ARINRIEEDG VVFQSHIDGA
RHAITPETSM ECQMQLGSDI AMCFDECTAY PVTYEYARES MLRTVRWAAR SKEAHTLPEQ
SLFGIVQGGV FCDLRRDCLE RLVETGFDGY ALGSLSVGES KEEMLSVLEA VAPGLPAASP
RYVMGVGTPE DLVEGVRCGV DMFDCVMPTR NARNGMLFTV RGGIQIKNSR YADDDRPIEE
GCSCYTCRRF SRAYLRHLFL ARELLAYRLN TLHNLHYYLG LMAAMREAIE ANAFDRWRRS
FYLDRENREP AEE
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