Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0564 |
Symbol | |
ID | 4461215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 686315 |
End bp | 687388 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639701320 |
Product | queuosine biosynthesis protein |
Protein accession | YP_844698 |
Protein GI | 116748011 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0641746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.715932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATG AGCGCATTTC CTACCGACTC CGGGAATACG ACTACGATCT CCCTCCCTCC CTGATCGCAC AATCCCCCTT ATCCCGAAGG GAGGAATCCC GTCTTCTCGT GCTGGACCGA GGCCGCGGCG CGATGGATCA CGTTCGCTTC CGGGATTTGC CGGACCATCT GCACGCCGAA GACCTGCTGG TGGTCAACGA CACCCGGGTG GTGCCGGCGC GTTTGATCGG CTTCAAGGAT TCGGGCGGCA GGATCGAATT GCTGGTGACG GAACCCTACA AAAGCGAAGC CGAAGGGCGG CGGGACGGTT ACTGGTGTCT TGCCGCGGCC GCAAAACGCA CCCGGCCCGG ATGCCTGATC TCGCTTCCCG ACGGTACGGT CGCTGAAGTT CTCGAGGCAG GCGACGGCGG GCGGATTCGA GTCCGGTTCC CTGACGACCG CCCGCTGATG ACGATCCTCT CGGAGATTGG AGCGGTGCCG CTTCCGCCAT ACATCAACCG GAGCGGAACC GGTGACTTTC CCGGAGACGC CGAAGCCTAC CAGACGGTGT ATGCGCGAAA TCCCGGAGCC GTGGCCGCGC CGACCGCCGG CCTTCACTTC AGCTCGGCAC TGCTGGAGGC CGTCGCACGG GCGGGGGTCG AAGTCGTCCG GATTACCCTT CATGTGGGAT ACGGCACCTT CGCCCCCATC AGGGTCGACG ATATCCGGGA CCACGAGATG CATCCGGAAT ACGTGCGGGT GGACGAGGAT TCGACGGAGC GGATCAGGTC CGCGATCGAT CGGAAAAGAC GTATCGTCGC GGTGGGAACC ACGGTCGTGA GGAGTTTGGA GTGGATCGCC CACCGGCGCG GCGAAATCAT GCCGGCCGCG GGGGCCTGCG CGCACTACAT CTACCCGGGC TACCGGTTCA AAGTCGTAGA TGCGATGATC ACCAATTTCC ACCTTCCCAG GTCCTCCCTT CTTCTGCTCG TTTCGGCGTT TGCCGGGCGC CGCCGAATCC TGGAAGCATA CCGGGAAGCG ATCCGCCGTG AGTACCGGTT TTTCAGTTAC GGCGATGCGA TGCTGATTCT GTAG
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Protein sequence | MADERISYRL REYDYDLPPS LIAQSPLSRR EESRLLVLDR GRGAMDHVRF RDLPDHLHAE DLLVVNDTRV VPARLIGFKD SGGRIELLVT EPYKSEAEGR RDGYWCLAAA AKRTRPGCLI SLPDGTVAEV LEAGDGGRIR VRFPDDRPLM TILSEIGAVP LPPYINRSGT GDFPGDAEAY QTVYARNPGA VAAPTAGLHF SSALLEAVAR AGVEVVRITL HVGYGTFAPI RVDDIRDHEM HPEYVRVDED STERIRSAID RKRRIVAVGT TVVRSLEWIA HRRGEIMPAA GACAHYIYPG YRFKVVDAMI TNFHLPRSSL LLLVSAFAGR RRILEAYREA IRREYRFFSY GDAMLIL
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