Gene Sfum_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0560 
Symbol 
ID4461211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp681773 
End bp682558 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID639701316 
Productsporulation domain-containing protein 
Protein accessionYP_844694 
Protein GI116748007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.510925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.582988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCACTC CTCCCAAAAT ATCCGCTCGT AATCTCGAGC AGCAGCAAGC TGCCAGGAAT 
CAGAAGCGGT TTGTCTTTTC ATTGGGCCCG AGACAGATCG TCCTCTGCGC GGCGGGTCTC
TTGCTCGCCA TGTGCTGGAT GTTCATATTC GGAATCCTGG TGGGGCGGGG GCTGCCGATG
ATATCCTCGG AAGACGTTTC CGTCCGGGCG GAATTCATGC GTTTCCTTGG CCTGGACCGC
CCGCCTCCCT CAACCGTCGA GAAAGCCGCG GAAACATGGC AGGCGCCGGA GAAGATGTTG
GAGTCGCTCA AATACTACGA GGAACTGACC CGCAAGGAGG TCTTCACCCA GGCCAAAACC
GCCGTTCCAC CGGGCGCCCC GTCGACGTCG CCTGCGGCAA AAGACGCCGC GGCAGATACC
CGGAACAAAC CGACCAAGTC CCTGCCGGTC CCCTTGTCGA CGCCGGACAA ACCTGAGTCG
TCGGACTCGG AAAAGACGGG TTCGGGGGCC GGCGGCCAGG AGCCGGTGGC GGCAAACAAC
GCTTCGGAAC ACTTCACTCT GCTGGTGGCG TCGCTAAAAG ACGCCGACAA CGCTCAGAAG
CTCGTGGAAC AGCTGCGCGC CAAAGGGTAC GCACCACGGC TGCACACCCT CGACCTCAAC
GGCGGTGGAC GATGGAACCG GGTCCTGGTC GGTTCTTTTC GCAACAGGGA ATCCGCGTTG
AAATTCGCAG CCGACTTCAA TAAGAAGGAA CGCATGGAAG GACTGGTCAT TCGCGAGTCC
AATTGA
 
Protein sequence
MGTPPKISAR NLEQQQAARN QKRFVFSLGP RQIVLCAAGL LLAMCWMFIF GILVGRGLPM 
ISSEDVSVRA EFMRFLGLDR PPPSTVEKAA ETWQAPEKML ESLKYYEELT RKEVFTQAKT
AVPPGAPSTS PAAKDAAADT RNKPTKSLPV PLSTPDKPES SDSEKTGSGA GGQEPVAANN
ASEHFTLLVA SLKDADNAQK LVEQLRAKGY APRLHTLDLN GGGRWNRVLV GSFRNRESAL
KFAADFNKKE RMEGLVIRES N