Gene Sfum_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0559 
Symbol 
ID4461210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp679995 
End bp681566 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content57% 
IMG OID639701315 
Productadenylate/guanylate cyclase 
Protein accessionYP_844693 
Protein GI116748006 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.855978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAC TGATCATCCA CGACACGGAA GGCGTGCAGG AAATCGATCT GGTGGATCGC 
AATTCCATCG GAAGGCTTTC TCGAAATCGC ATCAGGATTG CCGACGATCT GGTGTCCAAG
GAACACTGCC TGATCTATCT CGATCCCAGG GGCGGGTACG GCATCAAGGA TTTGGGCAGT
CAGAACGGCA CTTTCGTCAA CGGACATCGC ATCGTTCGCG AAACACCCCT GAGCGACAGG
GATGTGGTCA CCATCGGCAG GACAAGCTGT ATTTTCCTGG CCGGGGACCT CCCGCACGGG
ACCAGCGACG GCATGGAAGC GACGATCCAG TTCATGGACG CCGACCGTTC GTGGTCACAG
ATTGCCCAGG ACCGTTTTCT GCCCGAAGAA GAAATCTGGG ATGAGAAGGT TCTGCGCGCC
GATTATGAGA AGCTGCGCAT CGCTCACGAG CTCCAACGCG AAATCGGGCT CGAGCTCAAT
CTCGACCGGA TCTTTAATCG CATCCTGGAC CGTACTTTCC AGCTTCTCAA CTGTGATCGT
GCCGTCATTT TGATGGTGGG CGAAAACGGC GGGATGGAAG TGCGGGCATC CAAGACCCGT
CATTCCGGCG AGGACCTGGT GGTGTCTTCG ACCCTGGTCA ATTTCGTTCG CGAACACAAG
GTGGGCCTGA TTTGCGGGGA CGCCCTGGCG GACGAGCGTT TCAGCTGCGC CGAATCCATA
TGCAATCGCA ATATTCGTTC CTCCATGGCC GTGCCCATCG TTTACGAACA GGAGCTCCTG
GGAGTCATGA TCATCGATTC CTCGGCCTCG GTCAGAGCAT ACGCGGAAAA GGATCTGCTG
CTCTTCAACA ACATCGCCCA CCAGACTTCT CAGTTCACGA TGATGGCGAA AATGGCCAAG
CGAATCGAGG AGGAAGCTCT GACGCGAGAG CGTTTTCAGC GGCTCATGTC TCCCGACCTG
GCGGAAATGG TGGTCTCGGG CTCGATCAAG GTCGAAAAGG GAGGGCAAAA CCGCGTTGCG
ACCATCCTCT TTGCCGACAT CCGGGGTTTC ACGTCCATGT GTGAGAACAT GCGGGCGGCC
GAAGTGCTCA TCATGCTCAA CGAGTTCTTC GAACTGATGG TCGATGTGGG CTTCCGCCAC
GAAGGCACCG TGGCGAACTT CATAGGGGAC ATGATCATGC TGGTTTGGGG CGCTCCCGTT
TTTCATCCGG ACGACCCGGT TCGAGCCGTC CAGGCGGCGG TGGAGATGCA GGAGGTTCTT
GCCGAATACA ACAGGGGGCG TAGAGAAAAA GGGCTGCCGG AAATCGGAGT CGGCATCGGC
ATCAACACGG GGGACTTAAT GGCGGGGTAC CTGGGGTCCA CGCGAACCAT GACCTATTCG
GTGATCGGGG ATCCCGTCAA CGTGGCATCC AGGCTCTGCG CCCTGGCCAG GCAGAACCAA
ATCCTCATTT CGGAACACTC TCGTTTGAGT GTCGACAATC ATTTCGAGAC AGCCGAGATC
TCCACTGTCA AGGTTAAGGG CAGAAAGGCT CCCATCAGGA TTTACGAAGT GGTCGGAAGA
AAGCGGAATT GA
 
Protein sequence
MARLIIHDTE GVQEIDLVDR NSIGRLSRNR IRIADDLVSK EHCLIYLDPR GGYGIKDLGS 
QNGTFVNGHR IVRETPLSDR DVVTIGRTSC IFLAGDLPHG TSDGMEATIQ FMDADRSWSQ
IAQDRFLPEE EIWDEKVLRA DYEKLRIAHE LQREIGLELN LDRIFNRILD RTFQLLNCDR
AVILMVGENG GMEVRASKTR HSGEDLVVSS TLVNFVREHK VGLICGDALA DERFSCAESI
CNRNIRSSMA VPIVYEQELL GVMIIDSSAS VRAYAEKDLL LFNNIAHQTS QFTMMAKMAK
RIEEEALTRE RFQRLMSPDL AEMVVSGSIK VEKGGQNRVA TILFADIRGF TSMCENMRAA
EVLIMLNEFF ELMVDVGFRH EGTVANFIGD MIMLVWGAPV FHPDDPVRAV QAAVEMQEVL
AEYNRGRREK GLPEIGVGIG INTGDLMAGY LGSTRTMTYS VIGDPVNVAS RLCALARQNQ
ILISEHSRLS VDNHFETAEI STVKVKGRKA PIRIYEVVGR KRN