Gene Sfum_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0557 
Symbol 
ID4461208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp677187 
End bp677927 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID639701313 
Producthypothetical protein 
Protein accessionYP_844691 
Protein GI116748004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.309803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.219596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTAC GAGGAGAGGG GGAGATGTTC ATCTTCAGGA ACAGGATGGA ATGGAGTGTG 
CCGGCGCGGA TGGTGATGTC GGTTCTGGCG ATTTGCGCCT GCCTGCTGCT CTCGAACGTG
TGCTTCACAG GTGCGGCGGA AACACCCGCG GTGGAGTTCA AATGGGCGTT CGGAGCCTTG
ACGGAGGAGG ACGGGCAGTC GCGAATCGTG CCTGTGGGCC GGGATGCGGC GCTGAAAACG
GGCGATCGTC TGAAACTCAT GATTGAAATG AAGAGAAAGA GTTTCATTTA CGTCTTCCAC
CATAACGAAC GAGACGGTTT GACACTGCTG TTTCCCTATT CTTTCGAACA GTTCACGGCG
GATTACCGGC CCGCGGTCAA ATACTACATT CCACGCGGCG AGGCGTGGTT CGAGCTGGAC
AAGCAGCCGG GAACCGAAAA ATTTTATCTG TTGGCGTCGG CCGAGCGCCT CCTCGGCCTC
GAGGCGCTGT ATACCTCATA CCGGGCCGGC GATGCCCAGA CCAAACACCA ACTCTCGAAC
AAGATCCTGG ATAAGATACG GACCCTCAAG AGGCAGGGCC GGGATCTGGC AGCCCCCGCG
GAACGGCCTG TCGCAATAGG TGGAGCGGTC AGGGGAGTCC CGAAGCAGGC CGGACCCGCC
TTGCCCGACG TGGCGACCTT GGCCGAGGAG ATCGCTTCGT CCGGTGTCGT GTCCAGGACC
TACAACGTTG AGCACAAGTA G
 
Protein sequence
MRLRGEGEMF IFRNRMEWSV PARMVMSVLA ICACLLLSNV CFTGAAETPA VEFKWAFGAL 
TEEDGQSRIV PVGRDAALKT GDRLKLMIEM KRKSFIYVFH HNERDGLTLL FPYSFEQFTA
DYRPAVKYYI PRGEAWFELD KQPGTEKFYL LASAERLLGL EALYTSYRAG DAQTKHQLSN
KILDKIRTLK RQGRDLAAPA ERPVAIGGAV RGVPKQAGPA LPDVATLAEE IASSGVVSRT
YNVEHK