| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0548 |
|---|
| Symbol | |
|---|
| ID | 4461199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 666150 |
|---|
| End bp | 667043 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639701304 |
|---|
| Product | peptidase U61, LD-carboxypeptidase A |
|---|
| Protein accession | YP_844682 |
|---|
| Protein GI | 116747995 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.883395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC GCCCTCTCAA ACCCGGCGAT CGTATCGGTC TTGCGGCACC ATCGAGCCCA
TTCGATCGGG AAGCTTTCGA GCGGGGCACG GCAGTCCTTG AAGCCGACGG TTACCGACCC
GTACCCGGCA GACACATATT CAAGCGGAAC CACTACCTTG CCGGAACGGA CGCCGAGCGC
GCCGAAGATC TGATGCAATT GCTCGCCAAC CCCGAGATTT CAGCCGTGGT GTGCATCCGG
GGCGGCTACG GAAGCGGCAG GCTGCTTTCC CGGCTGCCGT TTTCCTCCCT GCGCGATCAC
CGCAAGCTCT TTCTGGGCCA CAGTGACATT ACATTCCTTC ATCTTGCTTT TGCTTCTCAA
ATGGGATGGA TCACTTTCCT CGGCCCCAAT CTTACCGGGA TCGGACAGTT TGAATCGCAG
TGGGAATACA CCCGCAGGGT GCTTGCGGGA GAAACGGAAT GCTCGTGGCG ATTTACATCC
GGTCAGGTAC TCCGGGAGGG CACCGCCGTC GGAAAGGTCC TGGGCGGAAA CCTGACCTGC
CTGGTACACC TTGTGTCCAC GCCGTTTCTT CCGGAGCTGG AGAAGGTCAT GCTCCTCGTG
GAAGACCGCG GAGAGGCCCC GTATCGACTG GACCGGCTCT TTACCCAACT GAAGTTGTCC
GGCAGGCTGG AACGCCTCGC CGCCCTTTTG CTCGGGGAGT TTCACGAGTG CGGGGACCGC
GCGCTCATCC ACGAGATGAT CCTCGAGCAG GTGCGAGACT ATTCTTTCCC GGTCGTTGCG
GACCTTCCGT TCGGCCATGG TTCGGTGAAT GAAGCGATCC CGCTCAACGT GGAGTTTTCG
TTGAACACGT ACGAGGGAAG TCTCAGAGCG GTTCAGAGTC CTTTTTGCGG ATAG
|
|---|
| Protein sequence | MKLRPLKPGD RIGLAAPSSP FDREAFERGT AVLEADGYRP VPGRHIFKRN HYLAGTDAER
AEDLMQLLAN PEISAVVCIR GGYGSGRLLS RLPFSSLRDH RKLFLGHSDI TFLHLAFASQ
MGWITFLGPN LTGIGQFESQ WEYTRRVLAG ETECSWRFTS GQVLREGTAV GKVLGGNLTC
LVHLVSTPFL PELEKVMLLV EDRGEAPYRL DRLFTQLKLS GRLERLAALL LGEFHECGDR
ALIHEMILEQ VRDYSFPVVA DLPFGHGSVN EAIPLNVEFS LNTYEGSLRA VQSPFCG
|
|---|
| |