| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0545 |
|---|
| Symbol | |
|---|
| ID | 4461196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 663044 |
|---|
| End bp | 663607 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639701301 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844679 |
|---|
| Protein GI | 116747992 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1636] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.395511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.561785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC GCCGCCTGCT GCTGCATATG TGCTGCGGTC CTTGCGCCAT CTATCCTTTG
AGAACGCTCA GAGCGGACGG CTGGTCCGTG CACGGGTTCT TCTACAATCC GAACATACAA
CCCTGCCGGG AATTCGAACG CAGACTCGAG GCCGCGCGCA CGGTATCGGA ACGGGAAGAG
CTCCCGCTGA TCGTTCGTGA CGATTACGAT CCGGTGGAAT TCCTGCGGAA CGTCGTCTTC
CGCGAGCAGC AGCGGTGCGT CTACTGCTAT TCGGTTCGAA TCGAGGCGGC GGCGCGGATT
GCCCGGAAAA GCGGTTTTGA CGCCTTCTCC ACCACCCTGC TCTACAGCAA GCTCCAAAAA
CATGAACTGA TCGAGGAAAT TGCGCGCGAC ACCTCGCGGA GAATCGGAGT CCCCTTCATC
TACCGGGACT TTCGTCAAGG CTGGAGGGAA GGTCACGAAG CGGCGAAAAT GATGGGCATC
TATCGGCAGC AGTATTGCGG GTGTATCTAT TCGGAGGCGG AGAGATACCA TCGCGGAGGG
AAGAAGGACC GCCCCCCGAA GTAA
|
|---|
| Protein sequence | MTTRRLLLHM CCGPCAIYPL RTLRADGWSV HGFFYNPNIQ PCREFERRLE AARTVSEREE
LPLIVRDDYD PVEFLRNVVF REQQRCVYCY SVRIEAAARI ARKSGFDAFS TTLLYSKLQK
HELIEEIARD TSRRIGVPFI YRDFRQGWRE GHEAAKMMGI YRQQYCGCIY SEAERYHRGG
KKDRPPK
|
|---|
| |