| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0539 |
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| Symbol | |
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| ID | 4460577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 657794 |
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| End bp | 658423 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639701295 |
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| Product | pilus assembly protein, PilO |
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| Protein accession | YP_844673 |
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| Protein GI | 116747986 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.577988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA GCCTTATACC GACCGGTGCA TTTACGGAGA AGTTGGCAGG CCTTCCGCTC
GCTCAAAAGG CGTTGCTCTT CTTGATCACC CTCGCGATCC TCGGAGCCGG TTTCTACTAC
CTCGTCTATG AGGACCAGGA AAAGGAGCTG GCGAAAGTGA CCGCAAGTGT GGCCGAGCAG
CAGAAGAAGC TGGCGTCGCT CAAGGAGGCC GCCGCTCGAG TGGACAAGCT CCAGAAGGAG
CTCGCCGCCT CGGAAGCGGA TTTCAACAGT CTTCTCGCCT TGCTTCCGGA CCAGAAGGAG
ATTCCGGGCT TGCTCGAAAG CGTTTCCCAA CTCGGTGCAA AAGTGGGTCT GGAAAATGTT
TTGTTCCAAC CTCAACCGGA ACAGCCGAAG GAATTCTATT CGGTCATCCC CATCCGGCTG
GATTTGTTGG GATCGTTCAA CGATCTGGAA GTCTTCCTGG ACAACGTCAG CAAGCTCAAC
CGGATTCTGA AGGTGGAGAC TCTGACCCTG AATCGGGTGA AGGATAAGGG AAGCGGAAGC
GGCCTGCAGG TGGGATGTAC GATCGTCACG TACAGGTTCG TGGACAGGCC CGTGCAGAAG
GATGCAAAGA AGGACCAGAA GAAGAAATGA
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| Protein sequence | MKKSLIPTGA FTEKLAGLPL AQKALLFLIT LAILGAGFYY LVYEDQEKEL AKVTASVAEQ
QKKLASLKEA AARVDKLQKE LAASEADFNS LLALLPDQKE IPGLLESVSQ LGAKVGLENV
LFQPQPEQPK EFYSVIPIRL DLLGSFNDLE VFLDNVSKLN RILKVETLTL NRVKDKGSGS
GLQVGCTIVT YRFVDRPVQK DAKKDQKKK
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