| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0530 |
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| Symbol | |
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| ID | 4460568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 644554 |
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| End bp | 647721 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701286 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_844664 |
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| Protein GI | 116747977 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.925852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCCA AGAGGAAAAT GTTTTGCGCC ACTCTCCTGT CCTTCCTTCT CTGTTGGAAC
AGCGTTTGCG CACAGCAGCT TCAGCAGATT CCCTCACCGC TTGCTCCGCC TTTTGCCACG
ACCTCCACTC CGGTCAGTGC GACCACCGGG TCCAGCCCGA CCACCACGAC GATCCCCGGG
ATCCCGGGCT TGCCTTCCCT GACGCTTCCC CAGGCGATGA TGCCGGTTCC GTGCGAGACG
CTCCTGCCCG GTCAGCTTCC GCCGGTCGGA ACACCTCCGG TGATTCCCGG TTTGCCCTCC
ACCGCGGGCC AGGTCCCGTA TCTGCAGCCG TGCGGGCCGG GCCAGATCCC CTATCAGCCG
CCGGGCGTGG CGACACAGGT CCCGTACCAG GCGCCCGGTA TTCCGAGCCA GGTTCCGTAT
CAGCCGCCCC AGGGCACGGC CGCCCAAGGT CCCTATCAGC CCGCTCCCGG TGTGGCGGGG
CAGGCTTTGG TCACCCAGCC TGGAGTCGGG ACGTCCCAAG TGCCCTACCA GCAACCGGGG
GTTCCGGTTC AGGGCGCCCC AGTGACGCAG CCCGGCGTCG CGGGCCAGGT TCCGTATCAG
CCGTCCGCAA TCCCGGGCCA GGTTCCGTCC CTGCAGCCCG GGGTATCCCT GCAGATGCCC
GTGCAACAGC CAATGGTTCC CGGCCAGCCG GGCTACCCCC AGCCGACGCC CCCCACTTCG
AGAGGCTATC AGGCGGGCCA GGTTCCGTAT CAGCAACCCG CTGAGCTCGC GGTCCCCCCC
ATTCTGCCGG TTGAGCCGCT CTCTCCCTTC GAAGAATTCG TCGCGGGTAA ATCCACTTCA
ACCCCCGCAA GCATATCGTT CGACATCAAG CAGTTCGGCT ACGATCTGTT CATCAATTCC
GGTTCGCCGC TGATCACGGG GTCTCCCATC AGCGGCACTG CCGTGCCGGG CACCACCGGA
GTGCCGGGCA TGCTCGGCGG CACAAGCGTC CAGACCATTC CGGGCATGCC CGGAATTCCC
GGAACAACCG GGCATACCGG CCCGATGAGC ACACAGTTCG GGCTGCCCAT CCTCAATGTT
CCGGTCAGCC CCTCCTACGT CATCGGACCG GGCGACGAAA TCCGGATCGC CGTCTGGGGG
AGCGTCGAAG GCACCTGGGA TGTTATCGTG GACAGGGACG GGACCATCTC CCTTCCCAAG
ATCGGAATCA TCGGCGTCAC CAACATGACC TTCCAGGAGG TCAAGGATAC TCTGAAGAAT
GAATTCTCCA AGTACTACCA GGACTTCCAG ATGAACGTGA GCATGGGGTC CCTCAAGACC
ATCCGGGTCT ACGTGGTTGG AAACGCACGC AATCCCGGCG CCTACCTGGT CACGTCCATG
TCGAGCATCG TGAACGGTCT GCTCGCCGCG GGCGGCCCGA GCAAGGCGGG TTCGATGCGC
AACATCGAGC TCAAGCGAAA CGGGGACACG ATCGCCGTGT TCGACCTGTA CGAACTGCTC
CTGAAAGGTG ACAAAACCAA GGACCGGCAG TTGATGGCCG AAGACGTCCT GTACATTCCT
CCCATCGGAT CGATGGTGGG GGTGGCGGGC AACGTGGAAC GCCCGGCCAT ATTCGAAATG
AAAGGGAAGA CGAAACTCTC CGAAGCCATC AAGATGGCGG GTGGTCCCAC GGCGGACGCC
TATCTGCAGC GCATCCAGGT GGAACGGGTC AGCCAGCGCA AGGCCAAGAT TTTTCTCGAT
GTGGACATGC AGGGCATCAA GGGCAAACAA GATATCGTTC TGCAGGACGG AGACATCGTC
AAGGTTTTCC CCATCAGCAT GTTCGTCACC AACCGGATCA TCCTCAAGGG GAACGTGCGC
AGACCGGGCG AGTACGAATG GAAGCACGGG ATGCGGGTGA AGGACATCAT CCGGAATTTC
GATGCGCTTC TCCCGGACGC AATGCTGGAA TATGCGCTCG TGGAAAGGCT GGTTGCACCG
GACAACCACC AGGAATACAG GACTTTCAAC CTGAGGGAGG CGATCTCGGG GACGGACAGG
AGCCAGAACA TCCTCCTGGA GCCCTATGAC ACGATCACCG TGTACAGCAA GTGGGAAATG
CAGGAACGGG AACGAGTGAG GGTCAGCGGC GCGGTCAACA GGCCGGGTGA TTTCGAGTTC
CGCGAAAACA TGAAGCTCTC CGACCTGCTC AAGCTGTCCG GAGGATTGAA GAAGACGGCG
GCCGCGGATA ACGCGGAAAT CACCCGCGTG GTTCCGACCG AGGCCGGGCC GAGGACCGAG
CAGATCCAGG TCAATCCCAC CCTGGCGCTG GCCGGTGATC CCGACTTCGA CATTCTGCTG
CACCGCGACG ACTACCTCAC CGTGAAAAGC GTTCCGGACT GGCAGTTGTA CCGAAAGGTG
TCCATTTACG GCGAAGTCAA ATACCCCGGG GATTACGCGC TTCAGAAGGG CGAGAGGCTG
TCCTCCCTGC TTGAGCGGGC CGGGGGCTTC ACGGACAGGG CCTATAAGCG CGGTTCCTCC
CTTTTCCGGG AGAGCGTGAG GCAGTTGCAG CAGCGGCAGA TGGGGGAGCT CATCGACATG
CTCGGGCGCC AGGTGCTGGC CAACAGTGCG GCCAACCTGA TGGGCGAGAT GACGCCCGGC
GAAGCCGAAT TTCAGGCCAC GCAGGCCAAG CAGCAGAAGC TGTTCCTCGA CACCCTCAGG
ACGCTTCAGG CGAAGGGGAG GGTGGTGGTG CAGCTGGATG AGCCCCGGAA GCTCAAAGGG
ACGGCCTTCG ACATCGAAGT CGAAGAAGGC GATCAGATCT ACATCCCCAT CAATCCTCGA
GTGGTTCAGG TCATCGGGGC GGTGTACAAC CAGACCGCCT TCGTATACGA GCCGGGCAGG
AACTACTCCT ACTACATCGA CCAGGCCGGC GGATATTCCC CGACGGCGGA CAAGGGCAAC
GTCTTCATCC TCAAGGCCGA CGGGTCCGCC GTCCAGCCCG GGAGAGGCAT CTTCTGGTGT
GTTGCGACCG CCAGGTGGCA GACCGGGGCC AACGGCAGGT TGGAACCGGG GGATACGGTC
ATTGTTCCCG ACAAGCTGGA CAAGGTCGCA TGGATGCGAA ACTTCAAGGA CCTCACGACA
GTCCTTTACC AGATCGCCGT CGGGACCGGC GTGTTGTTGA GGCTCTAA
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| Protein sequence | MRSKRKMFCA TLLSFLLCWN SVCAQQLQQI PSPLAPPFAT TSTPVSATTG SSPTTTTIPG
IPGLPSLTLP QAMMPVPCET LLPGQLPPVG TPPVIPGLPS TAGQVPYLQP CGPGQIPYQP
PGVATQVPYQ APGIPSQVPY QPPQGTAAQG PYQPAPGVAG QALVTQPGVG TSQVPYQQPG
VPVQGAPVTQ PGVAGQVPYQ PSAIPGQVPS LQPGVSLQMP VQQPMVPGQP GYPQPTPPTS
RGYQAGQVPY QQPAELAVPP ILPVEPLSPF EEFVAGKSTS TPASISFDIK QFGYDLFINS
GSPLITGSPI SGTAVPGTTG VPGMLGGTSV QTIPGMPGIP GTTGHTGPMS TQFGLPILNV
PVSPSYVIGP GDEIRIAVWG SVEGTWDVIV DRDGTISLPK IGIIGVTNMT FQEVKDTLKN
EFSKYYQDFQ MNVSMGSLKT IRVYVVGNAR NPGAYLVTSM SSIVNGLLAA GGPSKAGSMR
NIELKRNGDT IAVFDLYELL LKGDKTKDRQ LMAEDVLYIP PIGSMVGVAG NVERPAIFEM
KGKTKLSEAI KMAGGPTADA YLQRIQVERV SQRKAKIFLD VDMQGIKGKQ DIVLQDGDIV
KVFPISMFVT NRIILKGNVR RPGEYEWKHG MRVKDIIRNF DALLPDAMLE YALVERLVAP
DNHQEYRTFN LREAISGTDR SQNILLEPYD TITVYSKWEM QERERVRVSG AVNRPGDFEF
RENMKLSDLL KLSGGLKKTA AADNAEITRV VPTEAGPRTE QIQVNPTLAL AGDPDFDILL
HRDDYLTVKS VPDWQLYRKV SIYGEVKYPG DYALQKGERL SSLLERAGGF TDRAYKRGSS
LFRESVRQLQ QRQMGELIDM LGRQVLANSA ANLMGEMTPG EAEFQATQAK QQKLFLDTLR
TLQAKGRVVV QLDEPRKLKG TAFDIEVEEG DQIYIPINPR VVQVIGAVYN QTAFVYEPGR
NYSYYIDQAG GYSPTADKGN VFILKADGSA VQPGRGIFWC VATARWQTGA NGRLEPGDTV
IVPDKLDKVA WMRNFKDLTT VLYQIAVGTG VLLRL
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