Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0518 |
Symbol | |
ID | 4461630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 627279 |
End bp | 629387 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639701274 |
Product | hypothetical protein |
Protein accession | YP_844653 |
Protein GI | 116747966 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTCCA TGAAGAGAAC CATCGCCGTT TCGGTTATTG CCCTGGCAAT CGCGCTCGGA ACCTCATGGG CGGGTGCGGC AACCCTTGAA GTGATAGACG GGGAATACAA GCTGCCCGCC AGAATCCATG CCTCGGTGGC ATCCGACGTG AAGACGGAAC TGTGGGCTCA TGTCTGGCGC CCGCGCCCGC GCGGATCCTA TCCATTGGTG GTTTTTCTTC ATGGGAACCA CCCCACCTGC GGGCGATACG ACAGTGAACT GGGCGTGCGA ATAGACGATC GCGTCGATTA TACGACGACC GGCGAGTGCC CGTCCGGCTA CGTGGTGACC CCCAATCATC TCGGTTACGC CTATCTTGCG GGGACTCTCG CCTCGTACGG ATACGTGGTC GTTTCCATCA ATGCCAACCG CGGCGTCAAC GGAGCCAAGC CGGAAACCGA CGACTACGGT CTCAACCTGC GACGCGGACG TCTTGTTTTG CGCCACCTGC AGGAACTGGC GAAATGGAAC ACCGAAGGCG GCGCGCCCGC TTCGCTCGGT TTTCAACTCA AGGGTTTCAT CGACTTCACC CAGGTCGGGC TGATGGGGCA TTCTCGCGGC GGGGAGGGCA TGCGCGCGGC CGTGGCCCAG TTGAACGATC CCGACAGTCT TTGGCCGAAA CGTATCCCGG GGCTCAAATT TCGCTCCCTG TTCGAGATCG GCCCCGTCGA TGGTCAGACG AGTCGCACCC TGAACCCTGT GGGTGTTGTG TGGAACGTCC TTCTGCCCGG CTGCGACGGG GACGTCGCGG ACCTCGAGGG GATGAAGCCG TTCGACCGGA TGCTCCAGGA CGCGGCGGAG GCGGATTCGC TGAGCAAATC CACCTTTCAG GTCTTCGGTG CAAACCACAA TTTCTACAAC ACGCAATGGC AGATTTCGGA CTCCATGGGA TGCATCGGGC AGACAGCGAT CTTTCCCCAG TTGAAAGGAT CAGCGTCTCA GCGCCGCACT GCGCTGCGGT CGCTGGTGCC GTTCTTCCGC TCCAATTTGG GGCCCGCGCC CGTCGAAGGG CTGGCCAGGC GTTTCGATCC CAGCTTCCCC ATACCGTCGG GACTGGCTTC GGAGACGTCA TACGCTCGGG GTTTCACGCG GAGCCCCCGC CGATGCGAGA ATTTTGTCAT CGACAATTTC AACCGGCGGA CCGGGCTTTC GAGTCGGAAT GTGGCCAATG AATCCTCGGG GCTTTCGGGC TACGAACATG GAACGGCCGG CAAGAACCAG GATCCGACGC AGCGTGCCGC CGCGATCGAC TGGCGCAGAG CGGGCGGATT TTTCCAGGTC AACGCCGCCG CCGCGGGCGA GGGGCTGGAC GTCGGCAACT ACCACGCCCT CGAATTCCGC GTGATGCTGC GCTGCTTCGA CAAACTCTGC TGCTCGCCGG GCGATCCGAC CGGGGACGTC GACTTTTCGA TAGCCATCGC CAATGCCGAT GCCGTTCTCT CCAATCCGGT GTCTCTCAAA TCCGTGGCCG TGGTGCGCCG CCCGGGCGGT TCGTTTCAGG GCAGTTGGGT CAACTATAAC GAGCTGTTCC AGACCGTTCG CATTCCGCTG TCCGATTTCA CGGGTGCCGA TCTGTCCAAT TTCCGCGGCG TTCGTTTCAC CTTCGATCGC AGTCCAAAAT CTTTCATTTA CCTTGCGAAT GTGCGCCTGA CCAAGGCCCG CGCCGGAAAC GGCGCTCTCG CATCGGATGC GCAAACGCAA GTCGGGAGCG AAACCGTGGT GCAAACCCGC GCGCGGGATG AAGCCCAAGC GGATCGCAAC GAGATCGTCG CCATCCGCCT CCCGGGCGGG GCGGCCGCCG GCGTATCGGA GAAGGCGCGC GTTCCGGCCG TGGAGATCGA GGTCGCTTCG AGCCGTTCGT TTCCGGTGGG TGGAGCGCTG CCGACGCTCG TCGTGGGCGA CAAGACCTTC GCTCTTTCGC ACTACCCGTC CGGCGCCACC GATCGACTGG TGTTCACCCT GGAGGCGGGC CAATTCGAGG CGATCGAGCA GGGAGCCGAA GTCGGCGTTC GCATCGGCGG CGCGCGCCCC TGGCATTTCG GCCTGCTCGA CAAGTCGCTT GCCCGCTGA
|
Protein sequence | MNSMKRTIAV SVIALAIALG TSWAGAATLE VIDGEYKLPA RIHASVASDV KTELWAHVWR PRPRGSYPLV VFLHGNHPTC GRYDSELGVR IDDRVDYTTT GECPSGYVVT PNHLGYAYLA GTLASYGYVV VSINANRGVN GAKPETDDYG LNLRRGRLVL RHLQELAKWN TEGGAPASLG FQLKGFIDFT QVGLMGHSRG GEGMRAAVAQ LNDPDSLWPK RIPGLKFRSL FEIGPVDGQT SRTLNPVGVV WNVLLPGCDG DVADLEGMKP FDRMLQDAAE ADSLSKSTFQ VFGANHNFYN TQWQISDSMG CIGQTAIFPQ LKGSASQRRT ALRSLVPFFR SNLGPAPVEG LARRFDPSFP IPSGLASETS YARGFTRSPR RCENFVIDNF NRRTGLSSRN VANESSGLSG YEHGTAGKNQ DPTQRAAAID WRRAGGFFQV NAAAAGEGLD VGNYHALEFR VMLRCFDKLC CSPGDPTGDV DFSIAIANAD AVLSNPVSLK SVAVVRRPGG SFQGSWVNYN ELFQTVRIPL SDFTGADLSN FRGVRFTFDR SPKSFIYLAN VRLTKARAGN GALASDAQTQ VGSETVVQTR ARDEAQADRN EIVAIRLPGG AAAGVSEKAR VPAVEIEVAS SRSFPVGGAL PTLVVGDKTF ALSHYPSGAT DRLVFTLEAG QFEAIEQGAE VGVRIGGARP WHFGLLDKSL AR
|
| |