Gene Sfum_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0518 
Symbol 
ID4461630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp627279 
End bp629387 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content63% 
IMG OID639701274 
Producthypothetical protein 
Protein accessionYP_844653 
Protein GI116747966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA TGAAGAGAAC CATCGCCGTT TCGGTTATTG CCCTGGCAAT CGCGCTCGGA 
ACCTCATGGG CGGGTGCGGC AACCCTTGAA GTGATAGACG GGGAATACAA GCTGCCCGCC
AGAATCCATG CCTCGGTGGC ATCCGACGTG AAGACGGAAC TGTGGGCTCA TGTCTGGCGC
CCGCGCCCGC GCGGATCCTA TCCATTGGTG GTTTTTCTTC ATGGGAACCA CCCCACCTGC
GGGCGATACG ACAGTGAACT GGGCGTGCGA ATAGACGATC GCGTCGATTA TACGACGACC
GGCGAGTGCC CGTCCGGCTA CGTGGTGACC CCCAATCATC TCGGTTACGC CTATCTTGCG
GGGACTCTCG CCTCGTACGG ATACGTGGTC GTTTCCATCA ATGCCAACCG CGGCGTCAAC
GGAGCCAAGC CGGAAACCGA CGACTACGGT CTCAACCTGC GACGCGGACG TCTTGTTTTG
CGCCACCTGC AGGAACTGGC GAAATGGAAC ACCGAAGGCG GCGCGCCCGC TTCGCTCGGT
TTTCAACTCA AGGGTTTCAT CGACTTCACC CAGGTCGGGC TGATGGGGCA TTCTCGCGGC
GGGGAGGGCA TGCGCGCGGC CGTGGCCCAG TTGAACGATC CCGACAGTCT TTGGCCGAAA
CGTATCCCGG GGCTCAAATT TCGCTCCCTG TTCGAGATCG GCCCCGTCGA TGGTCAGACG
AGTCGCACCC TGAACCCTGT GGGTGTTGTG TGGAACGTCC TTCTGCCCGG CTGCGACGGG
GACGTCGCGG ACCTCGAGGG GATGAAGCCG TTCGACCGGA TGCTCCAGGA CGCGGCGGAG
GCGGATTCGC TGAGCAAATC CACCTTTCAG GTCTTCGGTG CAAACCACAA TTTCTACAAC
ACGCAATGGC AGATTTCGGA CTCCATGGGA TGCATCGGGC AGACAGCGAT CTTTCCCCAG
TTGAAAGGAT CAGCGTCTCA GCGCCGCACT GCGCTGCGGT CGCTGGTGCC GTTCTTCCGC
TCCAATTTGG GGCCCGCGCC CGTCGAAGGG CTGGCCAGGC GTTTCGATCC CAGCTTCCCC
ATACCGTCGG GACTGGCTTC GGAGACGTCA TACGCTCGGG GTTTCACGCG GAGCCCCCGC
CGATGCGAGA ATTTTGTCAT CGACAATTTC AACCGGCGGA CCGGGCTTTC GAGTCGGAAT
GTGGCCAATG AATCCTCGGG GCTTTCGGGC TACGAACATG GAACGGCCGG CAAGAACCAG
GATCCGACGC AGCGTGCCGC CGCGATCGAC TGGCGCAGAG CGGGCGGATT TTTCCAGGTC
AACGCCGCCG CCGCGGGCGA GGGGCTGGAC GTCGGCAACT ACCACGCCCT CGAATTCCGC
GTGATGCTGC GCTGCTTCGA CAAACTCTGC TGCTCGCCGG GCGATCCGAC CGGGGACGTC
GACTTTTCGA TAGCCATCGC CAATGCCGAT GCCGTTCTCT CCAATCCGGT GTCTCTCAAA
TCCGTGGCCG TGGTGCGCCG CCCGGGCGGT TCGTTTCAGG GCAGTTGGGT CAACTATAAC
GAGCTGTTCC AGACCGTTCG CATTCCGCTG TCCGATTTCA CGGGTGCCGA TCTGTCCAAT
TTCCGCGGCG TTCGTTTCAC CTTCGATCGC AGTCCAAAAT CTTTCATTTA CCTTGCGAAT
GTGCGCCTGA CCAAGGCCCG CGCCGGAAAC GGCGCTCTCG CATCGGATGC GCAAACGCAA
GTCGGGAGCG AAACCGTGGT GCAAACCCGC GCGCGGGATG AAGCCCAAGC GGATCGCAAC
GAGATCGTCG CCATCCGCCT CCCGGGCGGG GCGGCCGCCG GCGTATCGGA GAAGGCGCGC
GTTCCGGCCG TGGAGATCGA GGTCGCTTCG AGCCGTTCGT TTCCGGTGGG TGGAGCGCTG
CCGACGCTCG TCGTGGGCGA CAAGACCTTC GCTCTTTCGC ACTACCCGTC CGGCGCCACC
GATCGACTGG TGTTCACCCT GGAGGCGGGC CAATTCGAGG CGATCGAGCA GGGAGCCGAA
GTCGGCGTTC GCATCGGCGG CGCGCGCCCC TGGCATTTCG GCCTGCTCGA CAAGTCGCTT
GCCCGCTGA
 
Protein sequence
MNSMKRTIAV SVIALAIALG TSWAGAATLE VIDGEYKLPA RIHASVASDV KTELWAHVWR 
PRPRGSYPLV VFLHGNHPTC GRYDSELGVR IDDRVDYTTT GECPSGYVVT PNHLGYAYLA
GTLASYGYVV VSINANRGVN GAKPETDDYG LNLRRGRLVL RHLQELAKWN TEGGAPASLG
FQLKGFIDFT QVGLMGHSRG GEGMRAAVAQ LNDPDSLWPK RIPGLKFRSL FEIGPVDGQT
SRTLNPVGVV WNVLLPGCDG DVADLEGMKP FDRMLQDAAE ADSLSKSTFQ VFGANHNFYN
TQWQISDSMG CIGQTAIFPQ LKGSASQRRT ALRSLVPFFR SNLGPAPVEG LARRFDPSFP
IPSGLASETS YARGFTRSPR RCENFVIDNF NRRTGLSSRN VANESSGLSG YEHGTAGKNQ
DPTQRAAAID WRRAGGFFQV NAAAAGEGLD VGNYHALEFR VMLRCFDKLC CSPGDPTGDV
DFSIAIANAD AVLSNPVSLK SVAVVRRPGG SFQGSWVNYN ELFQTVRIPL SDFTGADLSN
FRGVRFTFDR SPKSFIYLAN VRLTKARAGN GALASDAQTQ VGSETVVQTR ARDEAQADRN
EIVAIRLPGG AAAGVSEKAR VPAVEIEVAS SRSFPVGGAL PTLVVGDKTF ALSHYPSGAT
DRLVFTLEAG QFEAIEQGAE VGVRIGGARP WHFGLLDKSL AR