| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0500 |
|---|
| Symbol | |
|---|
| ID | 4461577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 604271 |
|---|
| End bp | 605011 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639701256 |
|---|
| Product | nucleoside-diphosphate kinase |
|---|
| Protein accession | YP_844635 |
|---|
| Protein GI | 116747948 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACG ACCTCCAACA GACGCTTGTC CTGATCAAAC CGGATGCCCT TAAAAACTCT
CTGACCGGAT ACGTGCTCTC GCAGTTTTCA GAGTTTCACA CCGGCTTGAC CTTCGCCGGA
ACCAAAGTGG TGCACGTGAC CAGAATGCTC GCAGAGGAGC ACTATGCGGA ACACCGCGGC
AAGGTCTTTT TCCCGGCGCT TATCGAGATG ATCACGGGGC ACCTTCATTA TCCCGGGGAA
CCGGACAAAC AGCGGGTCAT CGCCATTGTT TACAAGGGAC CGGATGTCAT ACGAAAGGTG
CGCGAGATCT GCGGCCCCAC GAATCCCCAT GTGGCCAGAG ACGAAAAACC CGGATGCGTT
CGATCCCTCG GAACGGTTGT CGCCCTCAAA GATGCGCAGG GCAACATTGT CGGGGATAGA
ATGGACAATC TCATCCATGC CTCGGCCACT CCGGAGGAAG CGGAACGCGA AATCAAACTG
TGGTTCAGAC CGGATGATAT TCCCCCTGCA ATAAGAGCTT TCCCCACGGT TCATAGCGAA
GCGTGTTTCT ACTACAAGGA CGGACGCCTG TTCGAGAACT ATGAACCCGG CACCGTTTGT
GTGCTCGCCC CAGGGGATGT CGCGTGGGAA TCGGACCTGA ATACGCTCAA GGCCTTTGCC
GAGGGCATTC CCACCGATTC GTCGCTCCAG GGGGTTGTGG CCAAGTACCT GTTGAATCGT
AAAGTGTCCC TGTCCTGGTG A
|
|---|
| Protein sequence | MRDDLQQTLV LIKPDALKNS LTGYVLSQFS EFHTGLTFAG TKVVHVTRML AEEHYAEHRG
KVFFPALIEM ITGHLHYPGE PDKQRVIAIV YKGPDVIRKV REICGPTNPH VARDEKPGCV
RSLGTVVALK DAQGNIVGDR MDNLIHASAT PEEAEREIKL WFRPDDIPPA IRAFPTVHSE
ACFYYKDGRL FENYEPGTVC VLAPGDVAWE SDLNTLKAFA EGIPTDSSLQ GVVAKYLLNR
KVSLSW
|
|---|
| |