Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0483 |
Symbol | |
ID | 4461490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 579917 |
End bp | 580696 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639701239 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_844618 |
Protein GI | 116747931 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0518313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGCA AACGGATCAT CCCCTGTCTC GACGTTCGCG ACGGGCGGAC AACCAAGGGG ATAAAATTCA GGAACAACGT CGACATCGGC GACCCGGTGG ACATGGGACG ATTCTATTAC GAGGAGGGCG CCGACGAGAT CGTGTTCTAC GACATCACCG CGTCGAGCGA TCGTCGGGGC ATCATGCTGG ACGTGGTGAA AAGGGTTGCG GAGACCATCT TCATCCCCTT TTCCGTCGGC GGAGGGATCA GGACCCTCGA GGACATGCGG GACGTGCTCC TTGCGGGTGC CGAGAAGGTC AGCGTGAATT CCGCCGCGGT GCTCAATCCC GATATCATAA GCCAGGGCGC GGAAGCGTTC GGGAGCCAGT GCATCGTCCT GGGGATGGAC GTCAAACACG TCGCGCCCTC CACCAGGATT CCTTCCGGCT ACGAGATCGT GATCAACGGG GGCCGCACGA CCACGGGATT CGATGCGCTC TGGTGGGCAT TGGAGGCGGA GCGCCTGGGA GCGGGAGAGA TCTGTCTCAA TTCGATCGAC GCCGACGGCA CCCGCGACGG CTACGAGTTG AGGCTGACCC GGCTGATCTC CACCAGCGTC CGGATCCCGG TCATCGCATC GGGCGGAGCC GGAACTCCGA ATCATCTGGC CGACGTGCTG AAGCAAGGCC GGGCGGACGC CGCGCTCATC GCCTCCATGG TCCACTACGG CACCTACAGC ATCCGCCGGA TCAAGCAGTT TCTGGACGAC AACGGCATAA GGGTGCGGAA AACCTGGTGA
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Protein sequence | MLSKRIIPCL DVRDGRTTKG IKFRNNVDIG DPVDMGRFYY EEGADEIVFY DITASSDRRG IMLDVVKRVA ETIFIPFSVG GGIRTLEDMR DVLLAGAEKV SVNSAAVLNP DIISQGAEAF GSQCIVLGMD VKHVAPSTRI PSGYEIVING GRTTTGFDAL WWALEAERLG AGEICLNSID ADGTRDGYEL RLTRLISTSV RIPVIASGGA GTPNHLADVL KQGRADAALI ASMVHYGTYS IRRIKQFLDD NGIRVRKTW
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