Gene Sfum_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0477 
Symbol 
ID4461484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp570049 
End bp570765 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID639701233 
Product5-formyltetrahydrofolate cyclo-ligase-like 
Protein accessionYP_844612 
Protein GI116747925 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000127258 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000923392 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACCCGT TGGATATTGC GGACATCGTT TCACGGAAAG ATCAACTGCG AACGAGCTTT 
TTGTCGGCCG GGGGCCGATC TCCGGCACTA CCGCCCGAAG GTGCGCAGGG AAAAGCGGCA
GAGCGCCTGA GACATCTTCC CCGCTACAGG GAAGCGCAAT CGGTGATGAT CTCTCCGGTC
TCTTCTCTTT ACCAGGTCAG GTTGAACGCG CTCACCGACA GGAAGAGGCT CGTCATGCCG
ACTCCGGGAC TCCACAAGGG TTTTGTCGTC GTCGAGCCCG GGTTCATTCC GCCGAGACAG
AGGCATTCCG CCGTTCAGCC GGGTCCGGAA AACCCTTTCG CGACGCGCAT GCCCTACCGG
GAACCGCCGG GGTTTCTCAT TGACTTGATA GTGACCGAAG GTTTGATGGT GGGCCGCGAT
GGCGGGCGAC TCGGGGACGG TTCAGGCCAT CTGGATTTGC AGTGCGCGAT CCTGAGCTCC
CTTGGATGGC TCCACCCGGC CTTTGAAGTG GTCGGCCTCG TGGAGGATTG CCGGGTTGTG
CCTTCTGTTC CCATGAAGCC CGGCGATGTG GAGATCCATT GGATTGTGAC GCCCAGCCGC
ATGGAACGCA CGCCGGCTAC GGCGCAGGCC CGGATCGGGA TTCAATGGGA CAGGCTGTCG
TTGAAGCAGA TAAAGCGCAA CGATGCGCTG TTTTTTCTCT ATCGCGCGAG AAGTTGA
 
Protein sequence
MHPLDIADIV SRKDQLRTSF LSAGGRSPAL PPEGAQGKAA ERLRHLPRYR EAQSVMISPV 
SSLYQVRLNA LTDRKRLVMP TPGLHKGFVV VEPGFIPPRQ RHSAVQPGPE NPFATRMPYR
EPPGFLIDLI VTEGLMVGRD GGRLGDGSGH LDLQCAILSS LGWLHPAFEV VGLVEDCRVV
PSVPMKPGDV EIHWIVTPSR MERTPATAQA RIGIQWDRLS LKQIKRNDAL FFLYRARS