Gene Sfum_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0474 
Symbol 
ID4461481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp567833 
End bp568327 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID639701230 
Producthypothetical protein 
Protein accessionYP_844609 
Protein GI116747922 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000014845 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000680839 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAGCGAA GAGGGTTGGA ATTCGGTGTC GGATTGTTTT TACTGATCGG TTTGGCCTGC 
CTGGGGTACC TGTCGTTCAA GCTCGGCCAT CTGAATCTGT GGGGAGGGTC TGACTATCCG
GTCACGGCAA AATTTTCCAC GGTGGCCGGA CTGAAGGACA AAGCCAAGGT GTTCATGGCC
GGCGTGGCCA TCGGCGAGGT ACAGAGCATC GGCCTGAAAG ACGGAGAGGC GGTGGTTACG
CTCTCCATCA ACAAGGACGT CAAGCTGGAA GATGACGTCA TCGCCAGTAT CAAGACGTCG
GGGCTCATCG GCGACAAATA CGTGTCCGTC ACCGCGGGGG CCTCCGACCA GTACATCAAG
CCGGGCGGCG CCATAAGAGA CACTCAGCCG CCGCTCGATA TCGAAAACCT GCTGGGCAGG
TTCGTGTTCG GCAGTGTGGA ACAGCCCAAA GGGCAGGGCG GGGAAGGCAA ACAGGACGAC
GGCGCGCTGC GGTAG
 
Protein sequence
MERRGLEFGV GLFLLIGLAC LGYLSFKLGH LNLWGGSDYP VTAKFSTVAG LKDKAKVFMA 
GVAIGEVQSI GLKDGEAVVT LSINKDVKLE DDVIASIKTS GLIGDKYVSV TAGASDQYIK
PGGAIRDTQP PLDIENLLGR FVFGSVEQPK GQGGEGKQDD GALR