Gene Sfum_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0453 
Symbol 
ID4461039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp547611 
End bp548330 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID639701209 
Producthypothetical protein 
Protein accessionYP_844588 
Protein GI116747901 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.629046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG TGAGCCGTGT CATGATCCCG GTGGGAGCCG GCGCCCTGGC CTGTGAAATT 
CATCTGCCGG ACAAGCTGCC TTCTCCCGCG GTGGTGTGTT GCCACGGGCT GTTGAGCTCC
AAGGACAGCA CCAAGTACCT CTCCATTGCC GAGGAACTCA GGGCGGTGGG CATTGCGGCC
GTTCGTTTCG ATTTTTCCGG GGCCGGCGAA TGCACCGCGC CGCTCGGTCC CAACCTGTTG
GAGTCGTGGT TGAGGGACCT GGACGCGGTC CTGGGGTATG TAAGAGCCCG GACCTGGATG
GCCGGTCCCC TGGGACTGCT CGGCTCCAGC ATGGGAGGGT ACGTCTCCCT GCTCATGAGG
GATTCCGGCA GGCATCCCGT CAACGCGCTG GTCTGCTGGT CGACGCCCTT CCGACTGGAA
AGAATCAGGG CCGCTCTCGA AGACGGTGAT GAGCTGGCGC ACGTTTTCCC CGCGGGATTC
AAGCTCGGAC ACCCGCAAAC GCTCGCATCG CTGGGGCCGA TTCCGGGGAT ACTGGTGATT
CACGGACAGG AGGATGACCT GGTCCACTGG GAGCAGGCAA CGGACATCTA TCGACGCCTG
GGAGAACCCA GGAACCTGGT GCTCCTGAGA ACGGCCGAAC ACCGCATCCT CGATCCCGAA
TGGCGGCGGC TCGCCCTGAG ACTGAGCGTC GATTGGTTTC GGGAGCGCTT TTCGACCTGA
 
Protein sequence
MSPVSRVMIP VGAGALACEI HLPDKLPSPA VVCCHGLLSS KDSTKYLSIA EELRAVGIAA 
VRFDFSGAGE CTAPLGPNLL ESWLRDLDAV LGYVRARTWM AGPLGLLGSS MGGYVSLLMR
DSGRHPVNAL VCWSTPFRLE RIRAALEDGD ELAHVFPAGF KLGHPQTLAS LGPIPGILVI
HGQEDDLVHW EQATDIYRRL GEPRNLVLLR TAEHRILDPE WRRLALRLSV DWFRERFST