Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0446 |
Symbol | |
ID | 4461032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 537513 |
End bp | 538175 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639701202 |
Product | TetR family transcriptional regulator |
Protein accession | YP_844581 |
Protein GI | 116747894 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.73057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATGC TGAAAGGCGG CGGCAGGAGC GCAGACACCA GGGAACGGCT GCTCGAAGCG GCCGGGGAGA CGTTCGCGGC GCGCGGGTTC CGCGATGCCA CGGTGCGGGA GATCTCCCGG CGGGCCGGGG TGAACGTCGC CGCCGTGAAT TACTACTTTG GGGACAAGGA AGGACTCTAT TCGGCGGTCC TCAAGTACAC GCTGGATTCG GCACTGAAGA AATATCCGCC CGATCTGGGC CTCGACGGCG ACGCGACGGC CGAGGACAGG CTTTACGCGT TCATCCGTTC CATGCTCTAC CGGGTCACGG ATGAAGGGCG GCCGGCGTGG CACGGCAAAC TGATGATCAG GGAAATCGCA CAGCCCACGA AAGCGCTCGA CGAAATGGTG CTGACGGGGT TCGGCCCGTT GCACAGGAGC CTGATGTCCA TCGTCCGGGA GCTTGCGGGG GCGGGCGGGG ACGAGGAGCA AATCCGGCTT TGCGCGATGA GCATCCTCGG CCAGTGTCTG TACTATCACC TGTGCCGGCC GGTGCTCAAG GCACTGTATG CCCAGTCTTT CGACGTTCCC GAAATCGAAC GGCTGGCGGG GCACATCATG CGCTTTTCAC TGAACGGATT GAGGGTACTG CAGGCGAAAA CGGACAATCC GCGCATGGGT TGA
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Protein sequence | MGMLKGGGRS ADTRERLLEA AGETFAARGF RDATVREISR RAGVNVAAVN YYFGDKEGLY SAVLKYTLDS ALKKYPPDLG LDGDATAEDR LYAFIRSMLY RVTDEGRPAW HGKLMIREIA QPTKALDEMV LTGFGPLHRS LMSIVRELAG AGGDEEQIRL CAMSILGQCL YYHLCRPVLK ALYAQSFDVP EIERLAGHIM RFSLNGLRVL QAKTDNPRMG
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