| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0440 |
|---|
| Symbol | |
|---|
| ID | 4461026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 531028 |
|---|
| End bp | 531633 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639701196 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_844575 |
|---|
| Protein GI | 116747888 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.407872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.661672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATG CGCTGATCGT GAGCCTGTTG ATGGGAATGA TCATGATTCC GGTGGTGGAT
GCTTTTGCGC AACCGAAGGA CGCGAACATT CCGGACGCCG TTACCGTCAT CCACAGTCGC
AAGAGCGTTC GCAATTTCAC CGGGGAGACC GTGGGCAGGG ACGTTCTGGA GAAAATCGTC
AGGGCCGGCA TGGCCGCGCC CACGGCGGTG AACAGACAGC CATGGTCGTT TGTGATCGTG
ACCGATCGAA AGACTCTCGA CACGCTCAAC GACGCGCTGC CCTACGCCAA GATGCTGAAA
AAAGCCGGTG CGGCCGTCAT CGTGTGCGCC ATACCCGGCA AGGCATTTGA AAACAGCACG
GAGTTCGCGG TCATCGACAG CACGTGCGCC AGCGAGAATA TCCTGCTCGC AACGGAAGCA
TTCGGGCTCG GAGCGGTCTG GACCGCCGCG TATCCCTACA AGGACAGAAT GGATATCGTG
AGAAAGACCC TGAATATCCC CGAAAGCGTC ATCCCCTTGA ACGTCATTCC CATCGGGCAT
CCGACGGGAA CCGACAGGCC GAAGGACAAA TACCGGCCCG AGAACGTGCA CTGGGAAAAG
TGGTAG
|
|---|
| Protein sequence | MQNALIVSLL MGMIMIPVVD AFAQPKDANI PDAVTVIHSR KSVRNFTGET VGRDVLEKIV
RAGMAAPTAV NRQPWSFVIV TDRKTLDTLN DALPYAKMLK KAGAAVIVCA IPGKAFENST
EFAVIDSTCA SENILLATEA FGLGAVWTAA YPYKDRMDIV RKTLNIPESV IPLNVIPIGH
PTGTDRPKDK YRPENVHWEK W
|
|---|
| |