Gene Sfum_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0438 
Symbol 
ID4460405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp528864 
End bp530036 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID639701194 
Productradical SAM domain-containing protein 
Protein accessionYP_844573 
Protein GI116747886 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.777378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGTC TCCACCTTTC CCGCAAAGGA CCGTTTCCCA GGAAAAGGCT TCTTTTCTCC 
ATGAAGACAC GAATCAACCT GGCGTTTCTC AAGTCCCTCT TCTCGCGTGC CCGCGGCAGA
CCCTTCGGAG CATGGCAGAT CGAGCTGACC ACGCGCTGCC CCCTGCGATG CCGGATGTGT
ATCCGGTCCG GAAATCCATC CTGGCACCAC GCGGACATGG ACATCGAGCG TTTCCGGGCG
CTCGCCCCGT ATTTCAGGAA CGTTGAAAGC GCCGTCCTCG AAGGCTGGGG AGAAACCCTT
CTCTATCCCC ACCTGGTCGA AGCGGTTCGC ATCGTCAAGG AGGCCGGCAC CGCGGCCGGC
TTCGTCACCA GCGGATGGGG CCTCGACGCG CACCGCAGCG CTGAACTGGT GGAGGCCGGG
CTCGATTTCA TGGGCTTCTC CGTTGCCGGC GCGACCCCCG CAATGCACGA CGCCGTCAGG
ATCAACTCCA GCCTGGACGC CGTGCTGGCC GCCGTCGAGG AGGTCCGACG CGCCAAAACG
GACCGGAAGG CGCTCACCCC GTCCCTTCAC TTCGTCTTCC TGATGGTTCG CGACAACTGC
GCCGACAGTG TGCCGTTGAT CGACCTGGCC GGGGAAAACG GCATCGACAC CGTGCTGCTC
ATCAATCTCG TGCATGTGGC CGACGCCTGG CAGGATCGGC AAAGAATGTT CGTGTGCAGC
GGCGAGGCCG ACGAATCGGT TCTGGTCGAG GCAAACGCCC GGGCCGTGGA GCTCGGCGTC
AAGCTGCGCC GGGCGTCCCT TTCCGCCTGC GATATAGCGG TCTGCGAGGA GAACCCTTTA
AGGAACCTCT GCATATCCGT GAACGGAGAG GTCACCCCAT GCGTGTTCCT CTGTCCGCCC
GTCCCCTCCC CGTTCAAACG GATCTACTGC GGGACGGAGG TTTTCGTTCC GCGGGTGAGT
TTCGGAAACA TTTTCGAAGA GCCGTTCGAG GCCATCTGGA ACGATCCGCG CTACGTCGCC
TTTCGCGATG TGTTTTCTCA GCGCGAAAAA AGCTTCCGGG AGATGTACTC GGCATTGATG
TCCGACTCGA ACCGTTTCGC GGCGCTGCGA CGCCATGCGC CTCCCCCGCC CCCGGAACCC
TGCCGCACCT GCCACAAGAT GCTTGGCGTC TGA
 
Protein sequence
MPGLHLSRKG PFPRKRLLFS MKTRINLAFL KSLFSRARGR PFGAWQIELT TRCPLRCRMC 
IRSGNPSWHH ADMDIERFRA LAPYFRNVES AVLEGWGETL LYPHLVEAVR IVKEAGTAAG
FVTSGWGLDA HRSAELVEAG LDFMGFSVAG ATPAMHDAVR INSSLDAVLA AVEEVRRAKT
DRKALTPSLH FVFLMVRDNC ADSVPLIDLA GENGIDTVLL INLVHVADAW QDRQRMFVCS
GEADESVLVE ANARAVELGV KLRRASLSAC DIAVCEENPL RNLCISVNGE VTPCVFLCPP
VPSPFKRIYC GTEVFVPRVS FGNIFEEPFE AIWNDPRYVA FRDVFSQREK SFREMYSALM
SDSNRFAALR RHAPPPPPEP CRTCHKMLGV