Gene Sfum_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0435 
Symbol 
ID4460402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp527757 
End bp528122 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content55% 
IMG OID639701191 
ProductHicB family protein 
Protein accessionYP_844570 
Protein GI116747883 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.783956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGA TGCGATACGG AAAATACATT GCCTCTGTCG AATTCGATCA GCAGGCAGGG 
ATTCTCTACG GGGAAGTGAC CAATCTCAAT GACGTGGTCA CGTTTCAAGG CCGCTCGGTC
AGTGAGTTGG AACAGGCACT CAAGGAATCC ATCGAGAGCT ACCTGAACGC GTGCGCCAGA
TTCGGCAAGG AACCGGAGAG GCCGTATACG GGAGTATTCC AGGTCAGGAT ACGCCCGGAA
GTGCACCGAT GGGCCGTCAT GGCCGCACAG AGCGAAGGCA AGAGCCTGAA CAAATGGGTG
TCCGAAAAAC TGGAGGAGGC TCTCAAGGGA GAGCATCGCA TTGCCAACGA TCAGCCGGTC
CGATAA
 
Protein sequence
MITMRYGKYI ASVEFDQQAG ILYGEVTNLN DVVTFQGRSV SELEQALKES IESYLNACAR 
FGKEPERPYT GVFQVRIRPE VHRWAVMAAQ SEGKSLNKWV SEKLEEALKG EHRIANDQPV
R