| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0429 |
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| Symbol | |
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| ID | 4460396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 518756 |
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| End bp | 521158 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701185 |
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| Product | phenylalanyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_844564 |
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| Protein GI | 116747877 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.473039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCA GCTTGAAGTG GCTCCGGGAT TATGTTGAGA CCTCGCTTTC CGTCGAGGAA
CTGACGCATC GACTGACGAT GGTGGGGCTC GAAATCGACG GCTGTCATCC CTTGCATCCA
TGCCTGGGCA GGGTGGTGAC GGCACGGGTG GAAAAGGTTG AGCCGCACCC CCGGGCGGAT
CGTCTGAGCG TCTGCGAGGT TTCCGACGGG CACGGACGGT ACTCCGTCGT GTGCGGCGCG
CCCAATGTGA AGGCGGGGCA GATCGTTCCG CTGGCGCTTC CCGGCGCCGA ACTGGCAAGT
GGTGTCAAAA TCGGGCAGGC AACGATTCGA GGGGTGGCCT CGCTGGGCAT GCTCTGTTCG
CAGAAGGAAC TGGGACTGGG CGAAGACGCC TCGGGAATCT GGCCTCTGCC GGGCGAGGTG
CCTGTGGGGG TGCCCTTGTC CGAAGCCCTG GATCTAGACG ACACGATCCT CGACGTCGCG
GTGACCCCCA ACCGCGGCGA CTGCCTGTCC ATCGTCGGCA TTGCCCGCGA GATCGCGGCC
ATTTCCGGCG TGCGGTTGCG ATATCCGGCC GTTGCGTGCC GGGAAACCGG GCCGGAGGTC
GATTCCCTTG CCTCGGTTCG GATCGATGCT CCGGATGGAT GCCCGCGATA TGCCGCGCGC
GTTATCGAAG GAATCACCGT CGGGCCTTCT CCGCAATGGC TCAAGGACAG GCTGGAAGCC
GTCGGATTGC GGTCCATAAA CAATATCGTG GATGTGACGA ACTACATCCT GATGGAATTG
GGGCAACCGC TGCATGCGTT CGACTTCGAC CTTTTGCGCG AGCAACGGAT CGTCGTGCGT
TATGCCCGCG AGGGCGAACG ATTCACCACG CTGGATGGAA CCGAGAGAAT CTTGTTCGGG
GATACCCTGA TGATCTGTGA CGGTGTGGGA CCGGTTGCCG TGGCGGGGAT AATGGGAGGA
CTCGATTCGG AAATCGGCGC GCGGACGAGG CGCGTGCTCA TCGAGAGCGC CTGCTTCGAA
CCAAGGTGCA TACGGCGCAG CAGTCGCAAG CTCGGCTTGC GAACGGAGTC GAGCTACCGT
TTCGAGCGGG GTGTGGACCC GGAGGGTGTG ATCCGCGCCC TGGACCGGGC TGCTCAACTG
ATGGTGGAAG TCGGCGGCGG AGACCTCGCG ACGGGAAGGG TCGACGCGTA TCCTCGCCCC
GCCGAGAAAC CGGTGCTGGT CCTGAGGACG GACCGGGTGA ATCGTTTTCT GGGAACGGAC
CTCACCCCCG CGGAAATGGC CGGGGCGCTC CGCTCCATCG AGATGCAGGT CGAGGAGAAC
GGCGGCGGCC TCGAGGTGAT CCCGCCGACT TTCCGGCCCG ACATCACGCG CGAAGTCGAT
CTTGCTGAGG AAATCGCCAG GTTGGCCGGA TACGACCGGG TGCCCGTGAC CTACCCCGAG
GTGCGAATGG AAGCCGCTTC GCTGGATCGG CATCTGCAGG CGCGGATGGA CATCAAGGGC
TATCTCGAGG GCGCGGGGTT CTTTGAGGCC ATCAACTACT CGTTCGTTTC GATGGAATCC
CTTCGGAAAT TGAAATTCCC GGCGGGCGAC AGGCGCCTGA ATCCCGTTCA GATCAGGAAC
CCGCTCAGCG AGGAGCAGGC GGTGATGCGC ACCACGCTGG TGCCGAGCCT GCTGCAAACG
GCCCGGTACA ACTTCGATCA CAAGAACGAC GATCTGAAGC TGTTCGAATT GAGCAAGGTG
TTTCTGCCCG TCGAGGGGGC CCCGCTCCCC GAGGAGGTCC ACGAGGTGGC CGGGATTCTG
GCCGGAAAGC GTTCCCTGAA CCTGCTCTAC GGCGGCGATG ACGACGTGGA TTATGCCGAC
GCCAAGGGCA TCGTGGAAGG GATCCTGGAA CTCTTGCACA TCGAGGGCGT TCGATTTGAC
TCCGAAGCTC CGCCTCCTTA TCTGGACGCG GCATGCGCCG CCACGATCAT GCACGGGGAA
CTGAACCTCG GAGCCGTGGG AAGGGTGGCC GCCGACGTCC GGGCCGCCTT CGACCTGAAG
AAACCCGTGT TCGTGTTCGA TCTCGATTTC GAGAGACTGT TCGGAATCGC GCGGCCGCCC
GCCTTTTTCA GCAGTTTGCC GAAATTCCCG TCGGTTTCGC GGGACATGGC GCTCGTCGTG
GACGAGAGCG TTCCCGTGCA GGGGCCGTTC GATTTCATCC GGAGTCAGGG TGAAGCGCTC
TTGGAACACA TCGATATATT CGATATATAT AGAGACCCGC AATTGGGGGC CGGAAGAAAG
AGCATCGGGT ACAGGCTGGT TTACCGGGCT GCCGACCGCA GTTTGACCGA CGAGGAAGTG
AACCGCCTCC ATGAAGGTTT GGTGAGCAAG GTTCTGGTGG AGTTCGACGC CAGGTTGAGA
TGA
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| Protein sequence | MIVSLKWLRD YVETSLSVEE LTHRLTMVGL EIDGCHPLHP CLGRVVTARV EKVEPHPRAD
RLSVCEVSDG HGRYSVVCGA PNVKAGQIVP LALPGAELAS GVKIGQATIR GVASLGMLCS
QKELGLGEDA SGIWPLPGEV PVGVPLSEAL DLDDTILDVA VTPNRGDCLS IVGIAREIAA
ISGVRLRYPA VACRETGPEV DSLASVRIDA PDGCPRYAAR VIEGITVGPS PQWLKDRLEA
VGLRSINNIV DVTNYILMEL GQPLHAFDFD LLREQRIVVR YAREGERFTT LDGTERILFG
DTLMICDGVG PVAVAGIMGG LDSEIGARTR RVLIESACFE PRCIRRSSRK LGLRTESSYR
FERGVDPEGV IRALDRAAQL MVEVGGGDLA TGRVDAYPRP AEKPVLVLRT DRVNRFLGTD
LTPAEMAGAL RSIEMQVEEN GGGLEVIPPT FRPDITREVD LAEEIARLAG YDRVPVTYPE
VRMEAASLDR HLQARMDIKG YLEGAGFFEA INYSFVSMES LRKLKFPAGD RRLNPVQIRN
PLSEEQAVMR TTLVPSLLQT ARYNFDHKND DLKLFELSKV FLPVEGAPLP EEVHEVAGIL
AGKRSLNLLY GGDDDVDYAD AKGIVEGILE LLHIEGVRFD SEAPPPYLDA ACAATIMHGE
LNLGAVGRVA ADVRAAFDLK KPVFVFDLDF ERLFGIARPP AFFSSLPKFP SVSRDMALVV
DESVPVQGPF DFIRSQGEAL LEHIDIFDIY RDPQLGAGRK SIGYRLVYRA ADRSLTDEEV
NRLHEGLVSK VLVEFDARLR
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