Gene Sfum_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0427 
Symbol 
ID4460394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp517092 
End bp517445 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content58% 
IMG OID639701183 
Productribosomal protein L20 
Protein accessionYP_844562 
Protein GI116747875 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000768971 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGAG TAAAGAAAGC TGTTAAATCG CGCGAGCGCC GCAAGAAAAT CCTGAAGTTG 
GCGAAAGGCT ATCGTGGCGG CCGCGGGAAG CTGATTCGCA GTGCTTCCGA AACGGTGGAT
CGTGCCCTCA AGTTTGCCTA CCGCGACCGC AAGACCCGTA AACGCCAGTT CCGAAGCCTG
TGGATCATGC GCATCAATGC CGCCGCCCGC GAGCATGACC TGAGCTATTC GAGGTTCATG
CATGCCCTGA AGAAGGCAAA CATCGACATG GACCGCAAGG CATTGGCCCA TCTTGCCGTG
AACGACCCTG CAGCATTCGC CAAACTGGCC CGGATCGCCA AAGAAGCCGC CTGA
 
Protein sequence
MPRVKKAVKS RERRKKILKL AKGYRGGRGK LIRSASETVD RALKFAYRDR KTRKRQFRSL 
WIMRINAAAR EHDLSYSRFM HALKKANIDM DRKALAHLAV NDPAAFAKLA RIAKEAA