Gene Sfum_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0423 
Symbol 
ID4460389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp513020 
End bp513568 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID639701178 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_844558 
Protein GI116747871 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.424141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGC CGAATCTGCT CACCATTCTG CGCATCCTGC TCACTCCGGT GCTGGTGTGG 
CTGCTCCTAG AAAACAGGCT CAACGAAGCA CTGACGGTCT TCTTCATTGC CGGCGCGACC
GACGGGCTCG ATGGGCTGAT TGCTCGCGTG TTTCATCAGA AGTCCAAGCT TGGAGCCTAC
CTGGACCCGC TGGCCGACAA GATCCTGCTG GTCACCTCCT TCGTCCTGCT GGGGCACATG
GGGTACATTC CCTACTGGCT CGTGATCGTG GCGGTAAGCC GTGATGCGAT CATCCTGCTC
GGCCTGTTGA GCCTCATGTT TCACCAGGTG CGGGTGGAGA TCCAGCCCGT GCTGCTCAGC
AAGCTCACCA CGCTCTTTCA GTTGGGGACG ATTCTCGCGA CCATGGGTTC CGGGCTGTTT
CAGCTTCCTC AGGGGGGATA CACGGCCCTT TTCGTGACCA CCGCGGTGCT GACCGTTGCC
GGCGGCGTTC AGTACATTAT GATCGGGATT GCCTTGCTGG ACAGCCGGCG GGGCGGTCAC
GCGGATTGA
 
Protein sequence
MTVPNLLTIL RILLTPVLVW LLLENRLNEA LTVFFIAGAT DGLDGLIARV FHQKSKLGAY 
LDPLADKILL VTSFVLLGHM GYIPYWLVIV AVSRDAIILL GLLSLMFHQV RVEIQPVLLS
KLTTLFQLGT ILATMGSGLF QLPQGGYTAL FVTTAVLTVA GGVQYIMIGI ALLDSRRGGH
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