Gene Sfum_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0420 
Symbol 
ID4461022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp509723 
End bp510490 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID639701175 
Productcyclic nucleotide-binding protein 
Protein accessionYP_844555 
Protein GI116747868 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.554509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCAA TCGTTGACAA CGTTGAAGAA GAGAGAAGCG GGCTGAATCC GGCCCAAGCC 
CTGGAGATAC ACACTTACCG TTACGGCGAT GAGATATTCA GAGAGGGCGA GGAGTGCTCG
TGTTTCTTCG TGATCCTCAG CGGTCAGGTG AGAATCAGTC AGCGGGGGAA AAAGGTACGT
GTCCTGGAAG ACCAGGATGT TTTCGGCCTT GAAAACGTCA TTTTCAAGAG AGCGGCGCAC
TACACCGCTC GCGCCCTGAC CAAGTCGCGT GTCGCCGCCT ATGGCCCGGA AGCTCTCGAC
CACGTGATCC GGGAAAGCCC CAGGATGGTC AGGAGCGTCC TCGTGTCGAC CCTGCATCAG
CTCTCACAGA CCACCAAGCA CCTGCTGCAC GACGCCGACG CGTTTGCGCT CGAAGACGTG
AGCGTCAACT TTTACAATGA TGGTGAAATC ATTATCGAGG AAGGCACGAC GGGAAGCAGT
TTTTACCGGC TGGTTTCAAC CCAGGGCGGT CTGCGTGTGA CCATTGCGGG ACATGAAGTG
GCCCGAATCG AAAAACCCGG CGAGTTTTTC GGCGAAATGG CCGGGCTTCT CAGCCTGCCC
CGACAGGCCA CCATCACGAG TCTGGGAGAC AGCGTGGTCG AGATATACAA TATCGACGAT
CTGGAAATTA TAATTCGAGA TTATCCGGAC GTTGCTCTTC AGATGATGCG CACTCTCGTT
TCCCGGCTGG TGGAAATCAA CCGCAAGTTC GCAGGAAGTC TCGCATAA
 
Protein sequence
MHAIVDNVEE ERSGLNPAQA LEIHTYRYGD EIFREGEECS CFFVILSGQV RISQRGKKVR 
VLEDQDVFGL ENVIFKRAAH YTARALTKSR VAAYGPEALD HVIRESPRMV RSVLVSTLHQ
LSQTTKHLLH DADAFALEDV SVNFYNDGEI IIEEGTTGSS FYRLVSTQGG LRVTIAGHEV
ARIEKPGEFF GEMAGLLSLP RQATITSLGD SVVEIYNIDD LEIIIRDYPD VALQMMRTLV
SRLVEINRKF AGSLA