Gene Sfum_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0417 
Symbol 
ID4461019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp505888 
End bp507618 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content66% 
IMG OID639701172 
Productadenine deaminase 
Protein accessionYP_844552 
Protein GI116747865 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1001] Adenine deaminase 
TIGRFAM ID[TIGR01178] adenine deaminase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGG ATACAGGCCG CATGGCGCGG ATCATCGAAG CCGCCCAGGG CAAGCGTGTC 
GTTGATCTCT GCATACGGAG GTGCCGCCTG GTCAACGTGC TTTCGGGCAG CATCGACACC
GTCGATCTGG CAATCCACGA GGGGTTCGTC GCGGGCTGGG GGAGCTATCG CGCCGCGCGC
GAGATCGATG CCGACGGGAT GTACGTCTGC CCGGGATTCA TCGACGGACA CATTCATATC
GAAAGCACGC TGCTCGCTCC CGCCCAATTC TGCGCCGCGG CCGTGCCGCA GGGAACCGCG
GCGGTGGTGG CCGACCCCCA TGAGATCGCG AACGTTTTGG GGCTGAGCGG CATACGCTAT
TTTCTGGAAG CTTCCGAAGG CCTGCCTCTG GACTTCTTTT TCAATCTTCC GAGCTGCGTT
CCCGCCACGC CCCTGGAGAC GTCGGGCGCC GCGCTGCGCG CTCCGGATCT GGACGCTCTG
CTGCCTCACG AGCGGCTCAT CGGTCTTGCC GAGATGATGA ATTTCCCCGG CGTTCTCTCC
GGCTTTCCCG ACGTGATCGA CAAACTGCTG CTCTTCCAGG CGCGGCGCAT CGACGGCCAC
GCTCCGCAAC TGGGCGATTT GGGGCTCAAC GCTTACGTCG CCGCGGGAAT CACTTCCGAC
CATGAATGCA CGACGCTCGA GGAAGCCCGC GAGAAGCTGG CCAAGGGCAT GACCGTCATG
ATCCGCGAAG GCGGACAGTC AAGGGATCTC GCCGCCCTGT TGCCCGCGGT CGACGAGCAC
ACCTGGCCGC GCTGCTGCTT CGTGAGCGAC GACGTTCATC CGGACGGGCT TCTCCGGGAG
GGTCACATGA ACGTCATCGT GAATCGTGCC ATGTCGTTGG GGATGGCCCC CGTGAGGGCG
CTTTCCCTGG CCGCCCTGAC GCCGGCAAGG CATTTTCGCC TGGACCGCCG GGGAGCCCTT
GCCCCGGGGT ACCACGCCGA CTTCAGCATG AGTCCCACCC TCAACCCCTG GCAGCCGGAG
CGCGTGTTCA AGGCGGGCGT CGAGGTGGCC CGCGACGGCC GCCTCCTTCT CGATCTCGGG
AACGGCAACG GCGTAGCGGC TCCTCCCTCC CCCATGCACA TCACGCGCCT TCTGGCCGAG
GATCTCGTGG TGCCCGCACA GCCCGGCCTC CTCAGGATCA TCGGGGTCCG GGAGGGGACT
CTGCTCACCC GCAAGATCGT GCTCCCGCCC AAAATCCACG AAGGGGCCGC GGTGGCGGAC
CTCGATCGCG ACATTCTGAA GCTCGCCGTG TACAACCGCT ATGTCCCGGA CCGCCCCCCC
GCGGTGGCTT TCGTGCAGGG GTTGGGACTC AAGGAGGGGG CCATCGCCAC CACGGTGGCC
CACGATTCGC ACAACCTGAT CGTGGCGGGA GCTTCGGATG CGGACATCCT CCACGTGGTG
GACGCCGTCA GGAAATCGGG AGGAGGAATG GCCGCGGGTC GAACGGGAGC CGAGGTGGAC
GTGCTTGCGC TGCCCATCGC CGGGCTCATG TCCGATCAGC CCGTGGAACG GGTCGCCGAA
CGGCTGGAAC AGCTCCAGGG CCGCGCTCGC GCCGCGGGGA GCGGACTCCG CAACCCCTTC
ATGGCATTGT CGTTTCTGGC GCTTCCCGTC ATCCCCGAAT TGAAGTTGAC GGATCTTGGA
CTGATCGACG TTTCGACGTT TTCCCCCGTT TCGCTGTTCG AAACGTCGTG A
 
Protein sequence
MKWDTGRMAR IIEAAQGKRV VDLCIRRCRL VNVLSGSIDT VDLAIHEGFV AGWGSYRAAR 
EIDADGMYVC PGFIDGHIHI ESTLLAPAQF CAAAVPQGTA AVVADPHEIA NVLGLSGIRY
FLEASEGLPL DFFFNLPSCV PATPLETSGA ALRAPDLDAL LPHERLIGLA EMMNFPGVLS
GFPDVIDKLL LFQARRIDGH APQLGDLGLN AYVAAGITSD HECTTLEEAR EKLAKGMTVM
IREGGQSRDL AALLPAVDEH TWPRCCFVSD DVHPDGLLRE GHMNVIVNRA MSLGMAPVRA
LSLAALTPAR HFRLDRRGAL APGYHADFSM SPTLNPWQPE RVFKAGVEVA RDGRLLLDLG
NGNGVAAPPS PMHITRLLAE DLVVPAQPGL LRIIGVREGT LLTRKIVLPP KIHEGAAVAD
LDRDILKLAV YNRYVPDRPP AVAFVQGLGL KEGAIATTVA HDSHNLIVAG ASDADILHVV
DAVRKSGGGM AAGRTGAEVD VLALPIAGLM SDQPVERVAE RLEQLQGRAR AAGSGLRNPF
MALSFLALPV IPELKLTDLG LIDVSTFSPV SLFETS