Gene Sfum_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0416 
Symbol 
ID4461018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp505267 
End bp505824 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content54% 
IMG OID639701171 
Productrubrerythrin 
Protein accessionYP_844551 
Protein GI116747864 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCC GGGTGAATCT CTTTTGTGCT TCGGGGTGTC GCCCGAAACA TGACGGTTAC 
GTTGAACAAT TTAATAAGCA GACCCAGGAG GTGGAGATGA GCACGGTTTC TTGCAGTTCC
ATGGATGACG TCATCAATTT CGCCATATCG CGGGAAGAAG CCGCCATGGA CTTTTACCAG
AAATGCGCGG ACCGGGCCAG GAACCCCGGC ATCAAGAAAT TCTTCCAGGA AATGGTGCAG
GAGGAAGAAC GTCACCGCGC GCTGCTCAAG GACTTGAATC CGATGGACCT TGGCACGCTC
ACGCTGGACA AGGTCGAAGA CCTGCGGATC AGCGACTACC TGGTCGAAGT CAAGTTCACG
GAACAGGTCA CCTACCAGGA GGCGCTCACC CTGGCCATGA AAAAGGAAGA GAAGGCCCAC
GCCTTCTACG AGGCCTGGAA GAACAAGTGC ATGCACGAAA AGACGGCCAA ACTGTTCGAA
ATGCTCGCCG TCGAGGAACT GAAGCACAAG CGGAAGATCG AAACCCTCTA CGACGAGGAA
ATCCTCACCT GGGATTAG
 
Protein sequence
MDSRVNLFCA SGCRPKHDGY VEQFNKQTQE VEMSTVSCSS MDDVINFAIS REEAAMDFYQ 
KCADRARNPG IKKFFQEMVQ EEERHRALLK DLNPMDLGTL TLDKVEDLRI SDYLVEVKFT
EQVTYQEALT LAMKKEEKAH AFYEAWKNKC MHEKTAKLFE MLAVEELKHK RKIETLYDEE
ILTWD