Gene Sfum_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0412 
Symbol 
ID4461014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp500176 
End bp501096 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content59% 
IMG OID639701167 
ProductUbiA prenyltransferase 
Protein accessionYP_844547 
Protein GI116747860 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGAC TGATACTGTG GTTCAAGGAA ACGAGACCCC AATTCCTCTT TCTGTCGGTT 
GTTCTAGCCT TTCTTGGAAC GGCGATCGCC TGGTACTACG GGTCCTTCAA CCTCGGATAC
GCTCTTCTTG CGGGTTTCGG GCTGGTGCTG ACCCACGGCA GCGCCAATGC CATAAACGAT
TATTTCGATT ACAAGAGCGG AATCGACCTG CACGTCGTCA GGACCCCTTT CAGCGGGGGA
AGCGGACTCG TCCCCGACGG GAAACTTCCG CTTGGACATG CGCTCTGGGT TGGCGTCGTC
ACGTCGGTAG CCGCCCTGAT GATCGGCGTT TTTTTCGTGA TCGTGAGCGG CTGGCAGTTG
ATACCGCTCC TGGTTGCGGC AATTCTGTGC CTGGTCCTGT ATACGCCCGT GATATTGAGA
ACCAACCGGC CCGAGTGGTC GCCGGGGCTG GGGCTGGGCA TATTGCCCAT AATGGGTTTC
TATTTCGTGC AGACCGGCCG ATACGACTGG GTCGTCCTGG TCGCCTCGGT TCCCAGCGGT
ATCCTGGTGC ACAACCTGCT CCTGCTGAAC GAGTTTCCCG ATGTGGAGGC GGACAGGATG
GGCGGCAGGA AGACGACCCC CGTCGTGTAC GGCATGGAGG CCGCCGCCCG GGTGTTCAGG
ATTGCGACGG TATCCGTTTA TGTCTGGATT GTCGGGTGCG TGCTGTTGAC CGTTGCAACC
GGTCGAGTCG TGATGCCGGT CTATTGCCTG ATCGCGTTGT TCACTCTGCC TCTGGCCGTA
AAAGCCATGC GGGGGGCCGG GGAATACAGG GATATGAGCA GGCTGGTTCC GGCTCTGGGC
ACGAACGTGA TGTTCATCCT GCTGACCCAG GTCTTGCTGG GGGTGGGTTA CATCCTGGGA
AAGATCTTCC CCATATCGTG A
 
Protein sequence
MGRLILWFKE TRPQFLFLSV VLAFLGTAIA WYYGSFNLGY ALLAGFGLVL THGSANAIND 
YFDYKSGIDL HVVRTPFSGG SGLVPDGKLP LGHALWVGVV TSVAALMIGV FFVIVSGWQL
IPLLVAAILC LVLYTPVILR TNRPEWSPGL GLGILPIMGF YFVQTGRYDW VVLVASVPSG
ILVHNLLLLN EFPDVEADRM GGRKTTPVVY GMEAAARVFR IATVSVYVWI VGCVLLTVAT
GRVVMPVYCL IALFTLPLAV KAMRGAGEYR DMSRLVPALG TNVMFILLTQ VLLGVGYILG
KIFPIS