Gene Sfum_0410 details

Gene Information

• Locus tag: Sfum_0410
• ID: 4461012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophobacter fumaroxidans MPOB
• Kingdom: Bacteria
• Replicon accession: NC_008554
• Strand: -
• Start bp: 492634
• End bp: 496077
• Gene Length: 3444 bp
• Protein Length: 1147 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639701165
• Product: hypothetical protein
• Protein accession: YP_844545
• Protein GI: 116747858

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.301766
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATAAGC AACAGGCACG CAAACTCATC AAGCAAACAT TTGAGCAGCC GTTTGAGAAG 
ACGCGCTTTA CCACGCTGAT CAAAAATCTT CTCAATCGCT GTGAGGAAGC GCCACTTTCC 
TACAAGGGGC AGTACATCCC GGATGCCTAC AAGCCTTATA TCAGTGCCCT GGATCGTATC 
GGCAAATTCC ACGACGGGGA GCACGCCGTT GATATTCTGG TGATCAAGCT CAAGAAGGAA 
ACCTCGCTGG AACGCGCCCG CACCATGCAG CGGAATTTCG TCGCCTGGTA CCTCAACGGC 
AGCCGCGGCG ACAAGCTGAA AGACGCGGCA CTGGTCGCGT TCGTCTCCCC GGAGGAAACC 
GACTGGCGTT TTTCGCTGGT GAAGATGGAT TACCGGTTTG AACAGACGAA AACCGGCAAG 
ATGAAGGTGA AGGAAGAGTT CACCCCGGCC CGGCGCTGGT CCTTCCTGGT GGGCACCAAC 
GAACAAAGCC ATACCGCCCA GAGTCGACTG ATCAATCTAC TGGCCAATGA CGAACAGACA 
CCGACGCTGG CCGAGTTGGA AGAAGCCTTC AACATCGAAA CCGTCACTAC GGAGTTCTTT 
CTCAAATACC GCGACCTGTT CATCCGGACC AAGGAAGCGC TGGACCGGGT GGTGCGGGGC 
GATCCCAGGA TCGAGGCGGA ATTCGAGGCC AAGCAGGTGA ACACGGTGGA CTTCGCCAAA 
AAGCTCCTGG GACAGATTGT CTTCCTCTAC TTCCTGCAAA AGAAAGGCTG GTTCGGAGTG 
GGCCGAGATG CCCCCTGGGG AACCGGTTCG AGACAATTCC TGCGCGAGCT CTTTGAGCAA 
AAGCACGGCC GTTACGGTAA TTTCTTCGAC GATATCCTGG AACCTCTTTT TTATGAAGCG 
CTGCGCAACG ACCGCAGCCA CGATGATGAT TACTACAGCC GGTTCAACTG CAAAATTCCG 
TTCCTCAACG GTGGGCTGTT CGATCCCATT GACGATTACG ATTGGGTCCA CACCAACATC 
AACCTGCCCG ACAGCCTCTT TTCCAACCAG AACCGGACCG CCGAAGGCGA CATCGGCGAT 
GGAATCCTGG ACATTTTCGA TCGTTACAAT TTCACCGTCA AAGAAGATGA GCCGCTGGAA 
AAAGAAGTCG CCATCGATCC GGAACTGTTG GGCAAAGCAT ACGAAAAGTT CAACGCCATT 
CGGCCGGACA ACTTTGAAGA GTACAAACAG GTTTTAAGAA GCGGCAAGAA GGGGGATGAG 
AACAAATTCA ACAAGCAGTT CGGCGTCTAC TACACGCCCC GCGAGATCGT CCACTACATG 
TGCCGGCAGA GCCTGATCAA TTACCTGCAC ACCGAATTGG GCAAGGACAT AGTCACACAC 
AAAAAGCTGT TTGAAAAACA GACCACGATG TTCGGGAATC AAGCGAAAAG GGGCCAACTG 
GACTGCACCA TCGAGTACAA GCTGACGCCG CAGATTTCCA GGAAAGACAT CGAAACCCTG 
ATCCACCTGG GCGAACAGGT CAGTGCCAAT GAGGCGCGGG TGGAAAACAA GGGCAAGGAG 
ACCGTCACCT ATTCTTACAA GCTGCCGGAA AGCATCCGCA AGAACGCAGG GCCGATCGAC 
CGGAAGCTGG CGGATATCAC GGTGTGTGAT CCGGCGGTGG GCTCCGGTGC TTTTCCCGTG 
GGCATGATGA CGGAGATTGT TCGAACCCGA AACGTGCTGT CCACCTTTAT TCAGGAAGAC 
AAGCCAACCC CGTATGACCT GAAGCGTCGC TGTATCGAGC ATTCCCTGTA CGGCGTGGAT 
ATTGACGCCG GTGCCGTTGA GATTGCCAAG CTGCGGCTGT GGCTCTCGCT GATCGTCGAT 
GAGGACGATA TCAAGAATAT CAAGCCGCTG CCCAATCTGG AATACAAGAT CGTCTGTGGA 
GACTCGCTTC TCGGGTATCC CTACAAGCCA ATGGGACTTG ATGAAGTTGA AAAACTCAAA 
GAGCAGTTCC TGGAGGAAGT CAATCCAAAA CGGAAGAAGG AATTGAGAAA CCGCATCGAT 
GCAGCAATCT ATGGGTTGTT CAAGAATACC GAAAAGAGCC TCGGATACCA AGTCACCATG 
GATTTCAGGA CTAACTTTTC CGAGGTGTTT CGAACAAAAG GTGGATTCGA TGTAGTGGTG 
GCCAATCCCC CCTACGTACG ACAGGAGGCG ATTCGACACC TCAAGCCCAA GTTTAAAAAA 
ATTTTCAAGG ATTTCTATTG TGGTACGGCG GATATCTATA CGTATTTCTA TAAATGCGGC 
GTCGACCTGC TGAAATCCAA CGGGCATCTC TGCTTCATCG CTCCCAACAA GTTCATGCGG 
GCCAGTTACG GAAAGAATAC CCGCACCCTG CTGACCACCC GGGCAACCCC GAGGCTGGTC 
ATCGATTTTG GAGACCTGCC GATCTTTGAT GCCACAACCT ATCCGTCCAT CCTGCTGATT 
GAAAAGCGGA AACCGGATGG GCGGGATAAA GCCGTTACGG CTACCTTTAC CGATGCGTCC 
CAGCTTGCAA AGCTGGAAGA TAGCCTCTTG GACATCGCTT TCCTCATGCC TGTGAAAGCC 
CTCAGCAAAG AAGGTTGGAA TTTGGAGCGC TCGGATGTCT TGTCATTAAT GGAGAAGCTG 
AAGAAAATAG GCGTCCCATT GGGTGAGTAC ATCCAAGGAC GATTCTATCG GGGGGTACTG 
ACAGGTTTGA ATAAAGCCTT TGTCATTGAC GCCGCCACGC GTGAAAGGTT GATTGCCGAA 
GATCCGGCCA GTGCCGACGT TATCAAGCCT TGGCTCCGTG GCCGCGACAT TCGCAAGTGG 
AAGGCGGAAT GGGCGGGATT GTATGTCATC AATATCGCGA GCAGTTCCAA CAAAACATGG 
CCATGGTCGA ATGTAAAAAC AGAAGCTGAG GCTGTTCGCC AGTTCGAAGA GACGTATCCG 
GCGATTTACC GGCATTTAGC ACCGTGGGAA AAAGAGTTGC AGAAGCGTGA CGATCAGGGG 
AAATTCTGGT GGGAACTCAG GTCATGTGCC TACTATGAGG CATTTGAAGG AACCAAGATC 
ATCTATCCTG ATATTTCACA AGCATCGAAG TTTAGCTGGG ATCAAAGCAA TTCATATCTT 
GGCAACACGG TTTACATGAT CCCAACGGAC AAGCTCTGGC TTGTAGGGCT CCTGAACTCA 
AAATTTATCT GGTGGTATTA CTCCAATATC ACTTCAACTA TTCGCGGCGG CTTTGTCCGT 
TTTTTCAGCC AGTATATGGA AACTATCCCA ATTTCGCTAA TTTCCGATAG CCAAAAAACC 
TCTATAATCG AACGCACTCG TGCCATTCTT GCTGCCCCTG GCAGCCCTGC GGTTCCCACG 
CTCGAAGCGG AAATTGATCA AATTGTCTAT GTCCTTTACA ACCTGACTCC CGAGGAGATT 
CGAATTGTGG AAGGGGTGAA TTAA 

 

Protein sequence

MDKQQARKLI KQTFEQPFEK TRFTTLIKNL LNRCEEAPLS YKGQYIPDAY KPYISALDRI 
GKFHDGEHAV DILVIKLKKE TSLERARTMQ RNFVAWYLNG SRGDKLKDAA LVAFVSPEET 
DWRFSLVKMD YRFEQTKTGK MKVKEEFTPA RRWSFLVGTN EQSHTAQSRL INLLANDEQT 
PTLAELEEAF NIETVTTEFF LKYRDLFIRT KEALDRVVRG DPRIEAEFEA KQVNTVDFAK 
KLLGQIVFLY FLQKKGWFGV GRDAPWGTGS RQFLRELFEQ KHGRYGNFFD DILEPLFYEA 
LRNDRSHDDD YYSRFNCKIP FLNGGLFDPI DDYDWVHTNI NLPDSLFSNQ NRTAEGDIGD 
GILDIFDRYN FTVKEDEPLE KEVAIDPELL GKAYEKFNAI RPDNFEEYKQ VLRSGKKGDE 
NKFNKQFGVY YTPREIVHYM CRQSLINYLH TELGKDIVTH KKLFEKQTTM FGNQAKRGQL 
DCTIEYKLTP QISRKDIETL IHLGEQVSAN EARVENKGKE TVTYSYKLPE SIRKNAGPID 
RKLADITVCD PAVGSGAFPV GMMTEIVRTR NVLSTFIQED KPTPYDLKRR CIEHSLYGVD 
IDAGAVEIAK LRLWLSLIVD EDDIKNIKPL PNLEYKIVCG DSLLGYPYKP MGLDEVEKLK 
EQFLEEVNPK RKKELRNRID AAIYGLFKNT EKSLGYQVTM DFRTNFSEVF RTKGGFDVVV 
ANPPYVRQEA IRHLKPKFKK IFKDFYCGTA DIYTYFYKCG VDLLKSNGHL CFIAPNKFMR 
ASYGKNTRTL LTTRATPRLV IDFGDLPIFD ATTYPSILLI EKRKPDGRDK AVTATFTDAS 
QLAKLEDSLL DIAFLMPVKA LSKEGWNLER SDVLSLMEKL KKIGVPLGEY IQGRFYRGVL 
TGLNKAFVID AATRERLIAE DPASADVIKP WLRGRDIRKW KAEWAGLYVI NIASSSNKTW 
PWSNVKTEAE AVRQFEETYP AIYRHLAPWE KELQKRDDQG KFWWELRSCA YYEAFEGTKI 
IYPDISQASK FSWDQSNSYL GNTVYMIPTD KLWLVGLLNS KFIWWYYSNI TSTIRGGFVR 
FFSQYMETIP ISLISDSQKT SIIERTRAIL AAPGSPAVPT LEAEIDQIVY VLYNLTPEEI 
RIVEGVN