| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0403 |
|---|
| Symbol | |
|---|
| ID | 4461426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 485217 |
|---|
| End bp | 485657 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639701158 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844538 |
|---|
| Protein GI | 116747851 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.304841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGTC CATCGCTCGA AATCACGGTG GGGGTCTTCT TCATCCTGGG AGTCGTCTGC
ATGGCCTATC TTTCCCTGGT TGTCGGGGGG CCGGGCGCCC TGGGGGAACC CCACTACCGG
GTGAACGCGC TGTTCAACTC CATAACCGGG CTCAGAAGAG GGGCGGCGGT CGAGATTGCC
GGGGTCCGGG TGGGAAAGGT CCTGGACATC ACCCTCGAAA ACAACCAGGC CAGGGTGGTC
ATGGCGATCA GGGACGGCGT GCGCCTCAGC GACGATACCG TGGCTTCCAT CCGCACAAAG
GGGATCATCG GCGAGATATT CGTGAAGCTG ATTCCGGGCG GGTCGGGCAG GGATATTGGC
CCGGGCGACA CGTTGATCGA GACGGAATCG GCGATCAGTA TCGAAGAGCT GATCGGCAAG
TACATGTTCG AGAAGAAGTG A
|
|---|
| Protein sequence | MYRPSLEITV GVFFILGVVC MAYLSLVVGG PGALGEPHYR VNALFNSITG LRRGAAVEIA
GVRVGKVLDI TLENNQARVV MAIRDGVRLS DDTVASIRTK GIIGEIFVKL IPGGSGRDIG
PGDTLIETES AISIEELIGK YMFEKK
|
|---|
| |