Gene Sfum_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0388 
Symbol 
ID4461411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp465980 
End bp467491 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content62% 
IMG OID639701143 
ProductAcetyl-CoA hydrolase 
Protein accessionYP_844523 
Protein GI116747836 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID[TIGR03458] succinate CoA transferases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCG TGGGTTCCTA TCCCAAACCC AGCCCGGAAG AAGCCGTTTC TCATATCTTT 
CACGGCGCGA CGGTGGCGTT CAGCGGGTTC ACGAACGCCG GGGCGGCCAA GATCGTGCCG
CGCGCGCTGG CGGCTCGGGC CAGGGCCGTG CACGAAAAGG GCGATCCGTT GAAGATCCGC
GTGCTGACGG GGGCTTCGAG CGGGGAAAGC ATCGACGAAC CGCTGGCACA GGCACAGGCC
ATTTCCTACC GCGCGCCGTA CCAGAGCGGT CCGCGGCTGC GCAAGCAGAT CAACAGCCAG
GAAGTCGAGT ACGTGGACAT GCATCTGTCT CACCTGCCCC AGACGGTTCT CTCCGGGTTC
CAGGGCAGGC TGGATTTTGC GGTGGTCGAG GCCACCGAGA TCACGAGCGA CGGCCGGGTG
TACCTGACGT CCTCCATCGG AGCCTCTCCC ACCTACCTGA AATACGCCGA CAAGGTGATC
ATCGAAATCA ACCATCACCA TTCGCCGCGG CTGCGGGAGA TGACCGACAT CCTCATCATG
GCGCGTCCGC CTCACCGCAG TCCGCTGCCG CTCCACGACC CCCTGACCAA GGTCGGCTAC
CCGTACGCGG TCGTTGATCC CCGGAAGGTC ATCGCCGTCC TGGAAACGGA CGAACCCGAC
CGGGTGCCGA AGTTCACCGC GGGCGATCCC CGCAGCCACA AGATTGCGGA ACACGTGGTG
CGGTTCCTGT TGGACGAGAT GCTCGCGGGC CGGATCCCCA ACGAGTTCCT GCCCCTGCAG
GCCGGGGTCG GCAACGTGGC GAACAGCGTG ATGGCCGCCC TGGGGGAAAA CCCCTACATC
CCCCCGTTCA AGATGTACAC CGAGGTGTTT CAGGACTCCC TGGTCGACCT GATGCAAAAC
GGCAAAGTCC TGGCCGCCAG CACGACCGCG CTCACCATCA CTCCCGAGGT GCTCGGCCGA
ATTTATGCCA ACATGGACTA TTTCGTGTCG AAAATCGTTC TGCGTCCGCA GGAAATCTCC
AATCATCCCG GCGCAATCCG GAGGCTGGGA GTCATTTCCA TGAACACCGC GCTCGAATTC
GATATCTACG GCAACGTCAA TTCCTCGCAC CTGTACGGAA CCGACATCAT GAACGGCATA
GGCGGCAGCG CCGAATTCAC GCGCAACAGC TACCTGTCCC TTTTCATGTG CCCGTCCATC
GCAAAGGGCG GCAGGATTTC CTCCGTGGTG CCCATGTGCC CTCACATCGA CAACAACGAG
CACTCGGTGC AGGTGGTCGT CACCGACCGG GGGCTGGCCG ACCTGCGGGG ACTCGGCCCC
ATGCAGCGCG CCCGAACCAT TATCGAGAAG TGCGCCCACC CGTTGTACAA GGATTACCTG
TACCGGTACA TCGAGAAGTC CCGGATCGGT CACATTCGGC ACAATCTCGA GGACTGCTTC
GAGCTGCACA GCAACTTGAT GGATCATGGG GCCATGCTGC CGGATCTCGA TCTCTCGGGC
GTCACGGAGT AG
 
Protein sequence
MSIVGSYPKP SPEEAVSHIF HGATVAFSGF TNAGAAKIVP RALAARARAV HEKGDPLKIR 
VLTGASSGES IDEPLAQAQA ISYRAPYQSG PRLRKQINSQ EVEYVDMHLS HLPQTVLSGF
QGRLDFAVVE ATEITSDGRV YLTSSIGASP TYLKYADKVI IEINHHHSPR LREMTDILIM
ARPPHRSPLP LHDPLTKVGY PYAVVDPRKV IAVLETDEPD RVPKFTAGDP RSHKIAEHVV
RFLLDEMLAG RIPNEFLPLQ AGVGNVANSV MAALGENPYI PPFKMYTEVF QDSLVDLMQN
GKVLAASTTA LTITPEVLGR IYANMDYFVS KIVLRPQEIS NHPGAIRRLG VISMNTALEF
DIYGNVNSSH LYGTDIMNGI GGSAEFTRNS YLSLFMCPSI AKGGRISSVV PMCPHIDNNE
HSVQVVVTDR GLADLRGLGP MQRARTIIEK CAHPLYKDYL YRYIEKSRIG HIRHNLEDCF
ELHSNLMDHG AMLPDLDLSG VTE