Gene Sfum_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0376 
Symbol 
ID4461609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp449261 
End bp450160 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content60% 
IMG OID639701131 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_844511 
Protein GI116747824 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.625905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCG ATCCGGTGCC GCCGATCAGC CGCCTGCTGG ACGCACTCGC CCGCATGGAC 
AGGGGGACCT GCGCCCGGCT CGCCGATCTC GCCGGCGATC TGTGGCATCG GTTTGACAGA
CGGCACGTGG AAATCGTCCA CAGCAATCTG CGGCGTGCTT TCGGAGACGA CTTGAACGAC
GCGGACCGCA ATAAGCTTTG CCGCGCCGTT TTTCGGAACC TTGCCCGCGT GATCCTGGAG
TTCCCGTTTC TGCGGGTCCT GGACCGGCGA GTCGACGAAT TCATGTGCTT CGAAGGATAC
GAACACGTCG TGCAGGCCCG GGCCAAGGGC AAAGGCGTCC TCATCATGGC GTCGCATTTT
GGGAACTGGG AGATGATGTC CCTGGGGTGT TCCTACCGGT GCACTCCGTT CAGCGTGGTC
GTGAGACCCC TGGACAACCG GGTGCTGGAT GAACTGGTCA ACGATATGCG CTCCGCCGGA
GGCAACCGGA TCGTCCCCAA AAAAGGGTCC ATCCGGGAAG TCCTGCGCAT CCTCCGCCGG
GGCGAGTTGG TGGCGCTGCT CGTCGATCAG AATGTGGACT GGTACGATGG AGTTTTCGTT
CCATTCTTCC GTGATATCGC CTGCACCAAC AAGGCACTGG CCGTTCTCGC CCTGAGAACC
GGAGCGCCCG TCATCCCCCT ACACAATTTC CGGCGCCCGG ACGGGAAATA CCAGGTGGTG
ATCGAACCGG AGCTGGAATT GATTCGAACG GGGGATACCA CAAGCGATAT CGAAGAAAAT
ACGGCCCTGT TCAATCGTGT CATCGAAGGC TACGTTCGAC GTTACCCCGA ACAATGGTTC
TGGGTGCATC AGCGATGGAA GACTCGCCCC TGGCAGCCCT GGCCGAAAGG ACGGGAATAG
 
Protein sequence
MNIDPVPPIS RLLDALARMD RGTCARLADL AGDLWHRFDR RHVEIVHSNL RRAFGDDLND 
ADRNKLCRAV FRNLARVILE FPFLRVLDRR VDEFMCFEGY EHVVQARAKG KGVLIMASHF
GNWEMMSLGC SYRCTPFSVV VRPLDNRVLD ELVNDMRSAG GNRIVPKKGS IREVLRILRR
GELVALLVDQ NVDWYDGVFV PFFRDIACTN KALAVLALRT GAPVIPLHNF RRPDGKYQVV
IEPELELIRT GDTTSDIEEN TALFNRVIEG YVRRYPEQWF WVHQRWKTRP WQPWPKGRE