| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0370 |
|---|
| Symbol | |
|---|
| ID | 4460887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 442421 |
|---|
| End bp | 443479 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639701125 |
|---|
| Product | lipopolysaccharide heptosyltransferase III, putative |
|---|
| Protein accession | YP_844505 |
|---|
| Protein GI | 116747818 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.911139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTGA ACAACATAAA CAACATATTG GTGATCAAGT TCAAACATAT CGGCGACGTG
CTCGTGACCA CGCCTTTGTT TCGGAACTTG CGGATCCACT TTCCCGACGC CAGGATCTGC
GCGAGCGTGA TCCACAACAC GGTTGAAATG CTGTCGGACA ATCCCGACAT CGACGCGATT
TTCCCCGTGA ACCGGAGGTC CGGCCTGTGG ACACAACTCC GTCTCATCGG GGAGCTTCGC
AGGAACCGGT TCGATCTGGT CATCGATCTC AGCGAGGGCG ACCGAGGCGC CATCGTGGCG
TTCCTTACAG GCAGCCCCTG CCGCCTGGGC TACCGCAGGC GACGCAGTAA ATTCATGGGT
AGAGATCTGC TCTTCACCGA TTTGATGAGC AGCGTCGACA ACGACAAACA CGCCGTGCGC
TACCACCTCG AACCCTTGCG CGCCCTGGGG CTCCCGGTCA AGACGGAAAA GATGCGCCTG
CAATGGACCG ATGCGGTGGA GGAAAAAGTG GACCGGCTGC TCCGTGAACG GGGACTCAAG
GAACAGCCGT TTGTGGTGGT TCATCCGACG TCGCGCTGGC TTTTCAAGAG CTGGACCCCG
GAAGGCAACT CCGCCGTCAT CGATTTCCTG CGGGAACGCT GCCGATTGCC GGTGGTCGTT
ACCTGCAGCG ATGACCCGAA TGAGCTGGCC GTGGTGAAGA GCATCATGCA CGGCGTCCGG
GTGCCGGTCG TCGACTTGGC CGGACAGTTG ACCCTCAAGG AACTGGCGTC CCTGATCCGG
AAGGCGGTCC TCTTTTTCGG GGTCGATACA GCCCCCATGC ACATCGCCGC GGCGGTGGGC
ACGCCAGTGG TGGCGCTGTT CGGGCCTTCG GGCGATCACA TGTGGGGCCC CTGGGGCCAC
AGTCACGTCG TCGTGAGCCA ACCGTGGGAC TGTCGCCCGT GCGGCCGCGC CGGGTGCAAT
GACAGTGGGA GCAGCAGGTG CCTCGAAACG ATCCGCGCGG AAACGGTGAT CGACGCCCTG
TCCGCGAAAC TCCGGGACCT CGGCTTCACG CCCTCCTAG
|
|---|
| Protein sequence | MTLNNINNIL VIKFKHIGDV LVTTPLFRNL RIHFPDARIC ASVIHNTVEM LSDNPDIDAI
FPVNRRSGLW TQLRLIGELR RNRFDLVIDL SEGDRGAIVA FLTGSPCRLG YRRRRSKFMG
RDLLFTDLMS SVDNDKHAVR YHLEPLRALG LPVKTEKMRL QWTDAVEEKV DRLLRERGLK
EQPFVVVHPT SRWLFKSWTP EGNSAVIDFL RERCRLPVVV TCSDDPNELA VVKSIMHGVR
VPVVDLAGQL TLKELASLIR KAVLFFGVDT APMHIAAAVG TPVVALFGPS GDHMWGPWGH
SHVVVSQPWD CRPCGRAGCN DSGSSRCLET IRAETVIDAL SAKLRDLGFT PS
|
|---|
| |