Gene Sfum_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0365 
Symbol 
ID4460882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp436136 
End bp437680 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content63% 
IMG OID639701120 
ProductMltA domain-containing protein 
Protein accessionYP_844500 
Protein GI116747813 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.914991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCCGG GGCGTAAACC GAGCAGCGCG GCTCCGGATA TGTTGCCGAA AATTCTCTCC 
CTGGCTTTTG CGGCTTTGGT GCTGTTCGCG GGCTGCACAC CGCAGCCCGC ACCCAAACCG
ACCGCGGTCT CCGTGCTGCA ACGCCTGCCG GAGGAGCAAC TCCCCGATTT CAGCGACGAC
ATGGATGCGG CCTCGCTGCT CACAGCCGCT GAACGGAGCA TGAAGTTTTT CGACCGGGTT
CCCGCGGACC GCCTGTATTC ACTGGGTGAA GTGCAGGTCC GCGCGGACCT GCTCAAATCC
ACTCTGCAAC GCTTCCTCGA GCTCTGCCGG GCTCAGCGCC TCGACAGGAA AACCATTGCC
GCCGCCTTCG ACGTATTCCT CGTCGCCCCG CCGGACCGCC CTTCCCTCGT CACGGGTTAC
TATGAGCCCA TCCTCGAAGC CCGCGGTCGG CGCGACGAAA CTTTCCGCCA TCCTCTCTAC
GGGGTTCCCC CCGACCTGCT GACCATCGAT CTGCCTTCCT TCGATCCCGT GAAATTCCCC
ACGGGCCGCC TGATCGGACG GTTGAACGAG CGCAAGGTCG TTCCCTACTT TACGCGGGCA
CAGATCGACG GGGAGAAGGC TCTCGACCGG TGGGGAAGCG AACTGGCATG GCTGGCCGAC
CCGGTGGACG CCTTTTTTCT TCACGTGCAG GGTTCCGGGA TGCTCCGCAT GCCCGGCGGG
GACCGACGAA TCGGCTACGC GGGAGCGAAC GGACGCCCTT ACAGGAGCAT CGGCAAGGTG
CTCATCGACA GGGGCGTGAT GACCGTCGAT GAAATGTCCA TGCAGGCGAT TCGCGCCTAT
TTGGGGGCAC ATCCGGAACT GATGGAGGAG ATCCTGTGGC ACAATGAGAG CTACGTATTC
TTTCAATGGG TCAAAGAAGG CCCGATGGGA AGCATCAACG TGCCCTTGAC CGCCGGGCGC
TCCATCGCAA CCGACCCGCA GTTCCACCCT TCCGGCGCGC CGTGCTTTCT CGAAACACAA
AAGCCCCGCC TGGATGAACG GGGCAACGTG CTCGGATGGG AACCGCTCCA TCGCTGGGTT
TTGAACCAGG ACACCGGAGG TGCGATCAAG GGGCCCGGAC GAGTGGACCT GTTCTGCGGC
ACCGGGGAGC AGGGGGAATG GCAGGCGGGT CGGCTGAAGC ACCCCGGAAA GCTGATGATT
CTTATCAGGA AGGGCGGCAT CCCCTCCGGC AGTTCCCAAC CCGCAGTCCT GCGGCGCACG
GACGCAGGCT TGCCGGAGCT CCGCCCTCAG GAGACGTGCG GGGCCTCGCC CCGGGGTGCG
GCGATCGCCT GGCGATCGAG AAGGCATTGG AAAAGGATTC GCATTTCGTC GAAACACCGG
CTGAGCACGA TGATGGCCTT CAGGGGTTCA TCTTCTTTGC GTTCCATGTC GGAGACCGAT
GCCAGAGAAG TCAGCAGAAA CATCTGGGCC GCTCTGAATC GATCCGTGGT CAGCTCACCC
CGCAGCTTGA CCTGGCGAAG CAACATGGAA GGATCGGCCT GTTGA
 
Protein sequence
MCPGRKPSSA APDMLPKILS LAFAALVLFA GCTPQPAPKP TAVSVLQRLP EEQLPDFSDD 
MDAASLLTAA ERSMKFFDRV PADRLYSLGE VQVRADLLKS TLQRFLELCR AQRLDRKTIA
AAFDVFLVAP PDRPSLVTGY YEPILEARGR RDETFRHPLY GVPPDLLTID LPSFDPVKFP
TGRLIGRLNE RKVVPYFTRA QIDGEKALDR WGSELAWLAD PVDAFFLHVQ GSGMLRMPGG
DRRIGYAGAN GRPYRSIGKV LIDRGVMTVD EMSMQAIRAY LGAHPELMEE ILWHNESYVF
FQWVKEGPMG SINVPLTAGR SIATDPQFHP SGAPCFLETQ KPRLDERGNV LGWEPLHRWV
LNQDTGGAIK GPGRVDLFCG TGEQGEWQAG RLKHPGKLMI LIRKGGIPSG SSQPAVLRRT
DAGLPELRPQ ETCGASPRGA AIAWRSRRHW KRIRISSKHR LSTMMAFRGS SSLRSMSETD
AREVSRNIWA ALNRSVVSSP RSLTWRSNME GSAC