Gene Sfum_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0364 
Symbol 
ID4460881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp433974 
End bp435395 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content57% 
IMG OID639701119 
Producttype III restriction enzyme, res subunit 
Protein accessionYP_844499 
Protein GI116747812 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.913598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTAA AGGTGCTGAA CATATTGGTC GCAGAATGGA TAAAGATTCC CGCGGAAGGT 
TTGTCGCCGT TGCTGGAGCG CAAGCTGCAC GAGCGCCTTG TGTTCACGAA TCCGGACTAT
GAGATGCGGC ACAACAGAGG GGAATGGATA GGAAATATTC CACCGCAGAT CAGTTGTCTG
CGGCAGAAAG GACGTCACTA CCTGTTGCCG CGGGGATTCC TCGACCAGTT CGTGGATCTG
TGCAAGAAGT TTCAGCAGCC GTACCGCATC GTGGACAGGA GGCGTACGTT CGAACCGCTG
CCCATCGAAT TCCACGGGGA ACTCAAATCT TACCAGCAGG ATGCCGCCGA AGCGGTGCTC
GATCACGACT GCGGGACCCT GGTTGGGGGA CACAAGAGCG GCAAGACGGT GATCGCCCTG
TACACCATCG CCCAGCGTCG TCAACCCACG CTCATTCTTC TTCCCAAACT GGATCTGCTG
GAAGGATGGC TGACCAAAAT CGAAAACTTC CTGCAGATAC CAAGCTCCGA GGTCGGGATG
TTTTCCACGG GCGTGCACCA GATCGGCAAA TACATCACCA TCGGGCATAC CGGGGAGGTC
ATACGGTACT GGCGCAAGTT GTGGGAGCAT GTGGGATACC TCATCGTGGA CGAGTGCCAG
CGCTGCCCAT CGAAGATACT GACCAACCTG ATTCCCAACT TCGACTGCCG GTATATCCTG
GGACTCACCA ACACCACCCA GAGAAAGGAC CGCTTGTCCC GGCTCGTCTA TTACTACGTC
GGCGATGTGG TCTATACCAT CAATGACAAG GATGCCCGCG AAGGGCGAGG CATTATCCAC
GCTCATGTGG TCACGAGGCA GACCGATTTC GAATACCCGT ACAGCTCGCG CGCGGATTAC
CCCACCATGC TGCAGGCGCT CATGAAGGAT GAGAAACGAA ACCGGATCAT CGCCGACGAC
ATCGAAGCCG AGCTTCAAAA GAGCCCTCAT CCCCTGATCG TTCTGTCCGG GGGCGAAGAG
CAGGAGGACA CGCTGGGAGG GGAACTCAGG AGGCGCGGCA TTTCGGTCTT TCAGTACAGG
GCCGCCGAAC CCGAGGGGGG TGGTGATACG GACAGCCCGC CCTGTCCGCA GATGCCGGTG
TCCGAAGCTC CTCAGGCGGT ATTCGTCACT GCGCAGACAC TCACCCGATG CTCGCAGGCG
CTGAGCTCGA AAACCCTCGT CCTGGCTGTG CCCCTTTACT TCAGGAAGAA CCTTGCGCTC
GCCATTCGGG ACCTGTTCCA GAACGGCAGC AGCCCGGAAA GCAAGTTCAA GATCTACGAT
TACGTCGATC ACAAGATCGG CCTGCTGGAA AACTTCTTCC GAATGAGAAG CTACAATTAC
GGGGTTCACC CCGATGTGCT TCTCAACCCC AGCCTCAATT GA
 
Protein sequence
MFVKVLNILV AEWIKIPAEG LSPLLERKLH ERLVFTNPDY EMRHNRGEWI GNIPPQISCL 
RQKGRHYLLP RGFLDQFVDL CKKFQQPYRI VDRRRTFEPL PIEFHGELKS YQQDAAEAVL
DHDCGTLVGG HKSGKTVIAL YTIAQRRQPT LILLPKLDLL EGWLTKIENF LQIPSSEVGM
FSTGVHQIGK YITIGHTGEV IRYWRKLWEH VGYLIVDECQ RCPSKILTNL IPNFDCRYIL
GLTNTTQRKD RLSRLVYYYV GDVVYTINDK DAREGRGIIH AHVVTRQTDF EYPYSSRADY
PTMLQALMKD EKRNRIIADD IEAELQKSPH PLIVLSGGEE QEDTLGGELR RRGISVFQYR
AAEPEGGGDT DSPPCPQMPV SEAPQAVFVT AQTLTRCSQA LSSKTLVLAV PLYFRKNLAL
AIRDLFQNGS SPESKFKIYD YVDHKIGLLE NFFRMRSYNY GVHPDVLLNP SLN