Gene Sfum_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0360 
Symbol 
ID4460877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp428254 
End bp428691 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content56% 
IMG OID639701115 
ProductMerR family transcriptional regulator 
Protein accessionYP_844495 
Protein GI116747808 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000341554 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.726839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGG AGCGTCAAAA AGCCCTGTAT CCAATCGGTA TCGTCGCTGA ATTGTTGAAC 
ATTCATCCTC GGACACTGCG CATCTACGAA CAGGAAGGGT TGATCAAACC GGCCAGACGC
GGTGGGAAGC GTTTCTATTC GAACATTGAC CTCCAATGGC TGCGGTGCCT TCGTAAATTG
CTGACCGATG AGGGACTCAA CATTGCGGGG ATAAAGAAAC TGCTGACGAT AGCCCCCTGC
TGGAGCATTC GGGACTGCGA CGAGGAAACG CGCAAGCAGT GCCCGGCCAT CCTGAATTTC
CCGGTGCCCT GCTGGGAGTT GAAACCTCGC TGCTGCAAGG ATTCCGATCT GGCGTGCTCT
GACTGCGAGG TCTACCGGCA CAAGATGGAC CGGGTGATCA TGCTGAAATG CCCGGATTCG
GGCGTGGAAA AGACGTGA
 
Protein sequence
MEPERQKALY PIGIVAELLN IHPRTLRIYE QEGLIKPARR GGKRFYSNID LQWLRCLRKL 
LTDEGLNIAG IKKLLTIAPC WSIRDCDEET RKQCPAILNF PVPCWELKPR CCKDSDLACS
DCEVYRHKMD RVIMLKCPDS GVEKT